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Name : tssH (Pcar_2820) Accession : YP_006718599.1 Strain : Pelobacter carbinolicus DSM 2380 Genome accession: NC_007498 Putative virulence/resistance : Virulence Product : type VI secretion system ATPase TssH, putative chaperone Function : - COG functional category : - COG ID : - EC number : - Position : 3290118 - 3292817 bp Length : 2700 bp Strand : + Note : - DNA sequence : ATGAGCACCGCACAGATCAAAGCTCTGCTGGACAAACTGAACGAACACTGCCTGCAAGCCCTGGAATCGGCCGCCGCCTT TGCCGGGATGCGTGGTCATTTTGAAGTCTGTATCGAGCACCTGGTGGTCAAGCTGCTGGAGAAGGGCGAAGGGGACTTCG ACCTGATCCTGCGCCATTTCGACGTCAACCTGGACCGGCTCTGGCAGGCCATGCTGGACAACCTCAGCCGCCTGCGGTCC GGCAATCGCAACAAGCCGTCTTTTTCACTCCAGCTTCTGGAGTGGTTCGAACGGGCCTGGACGATCAGTTCCCTGCGCGA CCCCCAGGCCCAACTGCGCTCGGGTGCTCTGCTCGAAGCCCTGCTGGACCTGGCGCCGCGACTTCCCGGCACGGCTTGGC TGTCCCTGGAAGTCGTATCCCGCAATCTGCTGCAGTCCCACCTGGCCGAACTGATCCGGTTTTCGGTGGAAAACCCTCAA CTACCCAGTGCAGCCGAAGCCGTAGTGCCATCTCCGGCGACGGCGTCGGTCCGTTCTGCCGACACCGCTACTCCGCACCT GGACGCCTACACCACCGACTTCACGGCCCGGGCCGCCAAGGGTGCCATCGATCCGGTCCTGGGGCGCAACGACGAGATTC GTCAGATCATCGACATCCTGACCCGCCGCCGCAAGAACAATCCGATCCTGGTCGGCGAACCCGGCGTCGGCAAGACGGCC GTGGTGGAAGGCCTGGCCCTGCGGATTGCCGAAAACGGGGTGCCGGACAGCCTGAAAAAGGTCCGTCTGGTCGGGCTGGA TCTGGGCCTGCTGCAAGCCGGAGCCGGGGTCAAGGGAGAATTCGAAAAACGCCTGAAATCGGTGATCGAAGAGATAATCT CCTCGCCGACTCCGATCATTCTGTTTATCGACGAGGCCCACACCCTGATCGGGGCCGGCGGCGACGCCGGCCAGGGCGAT GCCGCCAATCTGTTAAAACCGGCCCTTGCCCGGGGAGAGCTGCGCACCCTGGCCGCCACCACCTGGAGCGAATACAAAAA GTATTTCGAGCGGGACGCGGCCCTGGAGCGCCGTTTTCAGATGGTCAAGGTGGAGGAACCCTCGCAGGACAACGCCATCG TCATGCTCAACGGCCTCAAGGGCCATTACCAGAAACATCACGGGGTACTGATCACCGATAGCGCGGTGGAGGCCGCGGTG AGCCTGTCGAGCCGCTACATCAATGGTCGCTACCTCCCCGACAAGGCCATCGACCTGCTCGATACCGCCGCCGCCCGGAT CTGCATGGGCAAGGCCGCCACTCCGGCAGAGGTGGATACCGCCCGCGAGCATCTGACCTATATCGAAAGGCGCCGCAAAC ACCTGGCCGAGGAAACCGCCCAGGGTATCCCCGCCGACGTCAACCTGCTGGCCGACCTGCAACAACAGGAAGAGGAGGCC CGCAAGCAATTGACCGAACTGGAGCAACGCTGGCAAGCGGAACGAGCCCTGGTCGGCCGGATTCAGGAATCCCGTACCGG CGGCAAGGACGCCCTCGCCGATCTGGCAACCCTGCAACGGGACCTGCAGGAATTACAGAAAAACTCTCCTCTGGTCCAGC CCGAAGTCGACGCCGACACCATCGCCCGGGTGGTGGCCGACTGGACCGGCGTTCCCGTGGGCCGGATGGTAAAAAACGAC CTGGCCAACCTGCTCGATTTCGAAAATACCCTGAGCCGGCGCATCATCGGCCAGGAGTCCGCCATCCACGCCATCGGCCA GTCGATTCGCTGCAGCAAGGCGGGCCTGCGGGAAAACCAAGCCCCCATCGGCGTGTTCCTGCTCACCGGCCCCAGCGGGG TGGGCAAAACCGAAACCGCCCGGGCCATCGCCGACACCCTGTACGGCGGGGAACGGTTCATGGTGACCATCAACATGAGC GAATACCAGGAGGCCCATTCGGTTTCGCAATTGAAAGGCTCGCCGCCTGGCTATGTCGGCTACGGCGAGGGCGGCATTCT GACCGAAGCGGTGCGCCAGAGGCCCTATTCGGTGATCCTGCTCGACGAGGTAGAAAAGGCCCATCCCGACGTACTCAACA TGTTTTACCAGGTCTTCGATCGGGGCTTCATGCGCGACGGCGAAGGACGGGAAATCGATTTCAAGAACACCGTGCTCATC ATGACCAGCAATCTGGGCGCCGAAACGATTCTGGATCTGTGCGCTCCTCCGGAACCGGTCGGCGAAGAGGAGGAGCCCGA AACGCCCTTCGCCCCACCATCCCACGGGGCCTTGATCGAGGCGGCCCGCCCCGCCCTGACGGCTCATTTCCCAGCGGCGC TGCTGGCCCGCATGCAGATCGTGCCCCTGCGTCCCCTGGATCGGGACACCCTGCGGCAGATCATCGCCCAGAAACTCGAC AAGGTCGCCCAGCGGCTGTTCGACGCCCACGGCATCCGCATGCGCTGCACCCCGGAGGTCATCGACCATCTCGTCGGCCG CTGCCATACCCCCGAATCGGGAGCCCGCGCCGTCAACACCCTGATCGAGCAAAACCTGTTGCCCGGCATCTCCCGCAGCC TGCTCGGCTTCATGGTCAACGAGGACATGCCGCAGCTCATGGCTCTCGAGGTTGGCGAAAACGGTGAACTTGAGTGCCTT TTCAGCGACATAGTGAAGGAGGACGAACCCCAATTCGCCCAGGCGGGGGCAGGTGGATAA Protein sequence : MSTAQIKALLDKLNEHCLQALESAAAFAGMRGHFEVCIEHLVVKLLEKGEGDFDLILRHFDVNLDRLWQAMLDNLSRLRS GNRNKPSFSLQLLEWFERAWTISSLRDPQAQLRSGALLEALLDLAPRLPGTAWLSLEVVSRNLLQSHLAELIRFSVENPQ LPSAAEAVVPSPATASVRSADTATPHLDAYTTDFTARAAKGAIDPVLGRNDEIRQIIDILTRRRKNNPILVGEPGVGKTA VVEGLALRIAENGVPDSLKKVRLVGLDLGLLQAGAGVKGEFEKRLKSVIEEIISSPTPIILFIDEAHTLIGAGGDAGQGD AANLLKPALARGELRTLAATTWSEYKKYFERDAALERRFQMVKVEEPSQDNAIVMLNGLKGHYQKHHGVLITDSAVEAAV SLSSRYINGRYLPDKAIDLLDTAAARICMGKAATPAEVDTAREHLTYIERRRKHLAEETAQGIPADVNLLADLQQQEEEA RKQLTELEQRWQAERALVGRIQESRTGGKDALADLATLQRDLQELQKNSPLVQPEVDADTIARVVADWTGVPVGRMVKND LANLLDFENTLSRRIIGQESAIHAIGQSIRCSKAGLRENQAPIGVFLLTGPSGVGKTETARAIADTLYGGERFMVTINMS EYQEAHSVSQLKGSPPGYVGYGEGGILTEAVRQRPYSVILLDEVEKAHPDVLNMFYQVFDRGFMRDGEGREIDFKNTVLI MTSNLGAETILDLCAPPEPVGEEEEPETPFAPPSHGALIEAARPALTAHFPAALLARMQIVPLRPLDRDTLRQIIAQKLD KVAQRLFDAHGIRMRCTPEVIDHLVGRCHTPESGARAVNTLIEQNLLPGISRSLLGFMVNEDMPQLMALEVGENGELECL FSDIVKEDEPQFAQAGAGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-134 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 5e-121 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-121 | 42 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-101 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssH | YP_006718599.1 | type VI secretion system ATPase TssH, putative chaperone | VFG2084 | Protein | 5e-131 | 46 |
| tssH | YP_006718599.1 | type VI secretion system ATPase TssH, putative chaperone | VFG2076 | Protein | 3e-135 | 43 |
| tssH | YP_006718599.1 | type VI secretion system ATPase TssH, putative chaperone | VFG0079 | Protein | 9e-112 | 42 |
