Gene Information

Name : Pcar_2712 (Pcar_2712)
Accession : YP_006718489.1
Strain : Pelobacter carbinolicus DSM 2380
Genome accession: NC_007498
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3166920 - 3167867 bp
Length : 948 bp
Strand : -
Note : -

DNA sequence :
ATGGAAAAAATTCGGATTGGCATTAGCGCTTGTCTGCTGGGACAGAATGTTCGCTACGATGGGGGGCATCAGCTCGATCG
CTTTTTGCGCGATACCCTCGGGTATTTTGTGGATTATGTACCGGTGTGTCCCGAAGTGGAGATGGGGCTGCCGATCCCTC
GTCAGACTCTGCGTCTGGTGGGTGACGCCGACTCGCCGCGGCTGGTGTTTTCCAAAAGTGGCGAAGATGTGACCGAGCGT
ATGACGAGCTGGGCAAAGAGGCGACTCGCAGAACTCGAAAAAGAAGACCTATGCGGATTTATCTTCAAGGCACGCTCACC
GAGTAGCGGTATGGCGCGTGTGAAACTCTACGATCGTCGCGGGGTGCCGAATAAAAACGGCGTCGGATTGTTTGCCCGTT
TGTTCATGGAGTATTTTCCGATGCTGCCGGTGGAAGAGGACGGTCGGCTCAACGATATCCGTCTGCGTGAAAATTTCATC
GAGGCCATTTTCACGTTTCGGCGCTGGCGCGATTTCCTCACCGAAGGTGCCACGCCTGAGAAACTGGTCGCTTTTCATGC
CCGACACAAATTGTTGCTCATGTCGCATAGCGTGGAGCTGGCACGGCAAATGGGGCGCCTGGTAGGGCGGGCAGGCGAGG
TGCCGGCAGAAGAGATTCTCCGTGATTATAAGCAGCTGCTCATGCAGGCGGTGCGCACTTTGACCACCCCCGCTAAACAC
AGCAATGTCCTGCAGCACGCCCTGGGTTATTTCAAACGACAATTATCTCATGACGAAAAGCAGGAAATGCTGCAACTGAT
CGATCAGTATCGACACGGCACGGTGCCGCTGGCTGTTCCCCTGGCACTGCTCAATCATTATGTGCGCAAATATCAGCCGC
CGTGGCTTGACGAGCAGGTCTACCTGCATCCCCATCCGATGGAACTGCATTTGCGTAGCGGCGTGTAA

Protein sequence :
MEKIRIGISACLLGQNVRYDGGHQLDRFLRDTLGYFVDYVPVCPEVEMGLPIPRQTLRLVGDADSPRLVFSKSGEDVTER
MTSWAKRRLAELEKEDLCGFIFKARSPSSGMARVKLYDRRGVPNKNGVGLFARLFMEYFPMLPVEEDGRLNDIRLRENFI
EAIFTFRRWRDFLTEGATPEKLVAFHARHKLLLMSHSVELARQMGRLVGRAGEVPAEEILRDYKQLLMQAVRTLTTPAKH
SNVLQHALGYFKRQLSHDEKQEMLQLIDQYRHGTVPLAVPLALLNHYVRKYQPPWLDEQVYLHPHPMELHLRSGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 4e-54 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 7e-54 41
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-53 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-53 41
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 9e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pcar_2712 YP_006718489.1 hypothetical protein VFG0490 Protein 4e-54 41