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Name : rlmH (Pcar_2576) Accession : YP_006718350.1 Strain : Pelobacter carbinolicus DSM 2380 Genome accession: NC_007498 Putative virulence/resistance : Unknown Product : 23S rRNA (3-N-methyl-pseudoU1915)-methyltransferase Function : - COG functional category : - COG ID : - EC number : - Position : 3025298 - 3025768 bp Length : 471 bp Strand : - Note : - DNA sequence : ATGAAGATCTGCCTGCTTTGCGTGGGGCGCCTCTCCATCGGTTACCTGCGCGAAGGCGCGGCCGATTTCGAAGCGCGTCT GCAGCGCTACCTTCCCGTGCGCATTGTGGAGCTGAAGGAAGAAAAGAGCGGCAAAAACGATGCGGAATATATTCGCCGCC AGGAAGGGCGCAGGATTCTTGAAAAAATTCCGGCGGGATCTTTTGTGATCGCGTTGGATGAGCGTGGTCGTTCCGTATCA TCGGAAAAGCTGGCCGCTTTACTCGAACGGCATATGATGGAGTCGACTCCCGAGTTGACCCTGATTATCGGTGGAGCCTA CGGCCTTTGTGATGAGGTCAAACAGCGCGCTGACATGCTGATGTCTCTGTCGGAGATGACTTTGACCCATCAGATGGCCC GTTTGGTGCTGCTTGAGCAGTTGTATCGCGGTTTTACCATTGTGAGAAACGAGCCGTACCATAACCGTTGA Protein sequence : MKICLLCVGRLSIGYLREGAADFEARLQRYLPVRIVELKEEKSGKNDAEYIRRQEGRRILEKIPAGSFVIALDERGRSVS SEKLAALLERHMMESTPELTLIIGGAYGLCDEVKQRADMLMSLSEMTLTHQMARLVLLEQLYRGFTIVRNEPYHNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ACL99851.1 | hypothetical protein | Not tested | Type-V SCCmec | Protein | 9e-22 | 46 |
| unnamed | BAC53844.1 | open reading frame X | Not tested | SRImec-III and SCCmec-III region | Protein | 2e-29 | 41 |
| unnamed | BAC57492.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 2e-29 | 41 |
| unnamed | BAB72121.1 | hypothetical protein | Not tested | Type-IVa SCCmec | Protein | 2e-29 | 41 |
| SAR0024 | YP_039501.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 3e-29 | 41 |
| unnamed | BAB72138.1 | open reading frame X | Not tested | Type-IVb SCCmec | Protein | 2e-29 | 41 |
| SAV0024 | NP_370548.1 | rRNA large subunit methyltransferase | Not tested | Type-II SCCmec | Protein | 3e-29 | 41 |
| unnamed | BAC67575.1 | open reading frame X | Not tested | Type-IVc SCCmec | Protein | 2e-29 | 41 |
| unnamed | BAA82243.1 | orfX | Not tested | Type-II SCCmec | Protein | 2e-29 | 41 |
| orfX | AAL26648.1 | unknown | Not tested | SCCcap1 | Protein | 1e-28 | 41 |
| unnamed | BAD24821.1 | conserved hypothetical protein orfX | Not tested | Type-V SCCmec | Protein | 2e-29 | 41 |
| orfX | BAA86653.1 | open reading frame X | Not tested | Type-I SCCmec | Protein | 2e-29 | 41 |
| unnamed | BAG06184.1 | conserved hypothetical protein orfX | Not tested | Type-VII SCCmec | Protein | 2e-29 | 41 |
| unnamed | BAB47681.1 | open reading frame X | Not tested | Type-III SCCmec | Protein | 2e-29 | 41 |
