Gene Information

Name : xerD (Pcar_1513)
Accession : YP_006717239.1
Strain : Pelobacter carbinolicus DSM 2380
Genome accession: NC_007498
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1771571 - 1772458 bp
Length : 888 bp
Strand : +
Note : -

DNA sequence :
ATGGATCAATATCTCGACCTTTTTCTTAATTATCTGGTGGTCGAAAAAGGCCTCTCCGCCAATACCCTGGATGCCTACGG
GCGCGACCTTGCCCGATATCTGGAATTTCTCTCTGTCAAGGGGGTAACAGGCTTGGAGCAGGTCAGCCCGCCCATGGTGG
TGGCCTTTTTGTCGGCTCTCAAGGAACGGGGGCTGTCGGCTCGCAGTCGCGCCCGCAAACTGGTTTCGTTGCGTATGTTT
CATCGTTTTTTGCTGGCCGAGAATCTGGCAACGACCAATCCCGCTGCGCAGGTGGCGGCACCCAAAAGCTTTGCCAAGTT
ACCGCAAATATTGACGCCTGACGAGGTTGAAAGCCTTCTCAGCGCCCCTGGCAATACCACCTGTTTTGATTTGCGTGACA
AGGCCATGCTGGAAATTCTCTATGCCACAGGCCTGCGGGTGTCGGAACTGGTAGGACTTACCTTGCAGGATTTACAGCTC
GATGTCGGTTATCTCACGGCCTTCGGCAAGCGCGCCAAGCAGCGTATCGTGCCTTTGGGAGATGCCGCCAGAGAGGCTGT
TCTTGAGTATTTATCCCATGGCCGTGGCGAGTTGGCGGGCGAGGTCGGTTCGGGGTTTTTGTTTTTGAATCGTTCAGGTA
ACGGGTTGACACGACAGGGGTTCTGGAAGATGATGAAGCGCAGAGCGATGGAGGCGGGCATCAATAAAAATATTACGCCT
CACACTTTGCGACATTCATTTGCTACCCACCTGCTGGATAACGGCGCCGACCTGCGTGCCGTCCAGGCGATGCTGGGGCA
TGCGGATATTTCCACCACCCAGATTTATACCCATGTAACCAGAGAGCGAATGAAGGTTATTCACCAACAGCATCACCCGC
GTGGGTGA

Protein sequence :
MDQYLDLFLNYLVVEKGLSANTLDAYGRDLARYLEFLSVKGVTGLEQVSPPMVVAFLSALKERGLSARSRARKLVSLRMF
HRFLLAENLATTNPAAQVAAPKSFAKLPQILTPDEVESLLSAPGNTTCFDLRDKAMLEILYATGLRVSELVGLTLQDLQL
DVGYLTAFGKRAKQRIVPLGDAAREAVLEYLSHGRGELAGEVGSGFLFLNRSGNGLTRQGFWKMMKRRAMEAGINKNITP
HTLRHSFATHLLDNGADLRAVQAMLGHADISTTQIYTHVTRERMKVIHQQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-55 45
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-55 45