Gene Information

Name : lolD (Pcar_1250)
Accession : YP_006716968.1
Strain : Pelobacter carbinolicus DSM 2380
Genome accession: NC_007498
Putative virulence/resistance : Resistance
Product : lipoprotein release ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1469758 - 1470441 bp
Length : 684 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTAGGGGGGCTGCTATGATCGAGGTTACGAATTTATGCAAAAGCTTCGTTAGCGGTACCCGTCGGGTTGATGTGCT
TTCGCATGTCGATATGAAGATCGATGCCGGCGAAAGGGTTGCAGTGGTCGGTGCTTCAGGGGCAGGCAAGACGTCTCTGA
TGCATATCCTTGGAGGCCTGGATCGCCCCACCAGCGGCGATGTCCTATACGATAAGCAGGATATCTTCAGTCTCAAGGGG
GCTGGGCTTGACGATTTTCGCAATCGCACTCTCGGTTTTGTTTTTCAATTCCATCAACTGCTGCCGGAGTTTACGGCGCT
GGAAAATGTCATGCTGCCGGCTCTGATCGCCCGATGGTCGCGCGCCAAGGCAAAGTCCGCGGCCAGGGAACTGCTTACGG
AGGTTGGCCTCGAGTCGCGGTTGAGCCACAAACCGGGGGAATTATCCGGAGGCGAGCAGCAACGCGTCGCCATCGCACGG
GCGTTGGTCGGGTCGCCCCGGGTGCTGTTTGCCGATGAGCCGACCGGCAATCTTGACAGCAATACCTCCGAAAGCATTTA
TCGGTTGTTGTCCAGGCTGCATGAGACCCGTGGACTTACTCTGTTTATCGTTACACATGACGCCCGTCTTGCGGCTGGCC
TCGATCGTGTCGTGCATATGGCAGATGGCCGAATTACCGGCTAG

Protein sequence : 
MSRGAAMIEVTNLCKSFVSGTRRVDVLSHVDMKIDAGERVAVVGASGAGKTSLMHILGGLDRPTSGDVLYDKQDIFSLKG
AGLDDFRNRTLGFVFQFHQLLPEFTALENVMLPALIARWSRAKAKSAARELLTEVGLESRLSHKPGELSGGEQQRVAIAR
ALVGSPRVLFADEPTGNLDSNTSESIYRLLSRLHETRGLTLFIVTHDARLAAGLDRVVHMADGRITG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_006716968.1 lipoprotein release ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-32 43
lolD YP_006716968.1 lipoprotein release ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-30 43
lolD YP_006716968.1 lipoprotein release ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-35 41