|
Name : lysS (Pcar_1248) Accession : YP_006716966.1 Strain : Pelobacter carbinolicus DSM 2380 Genome accession: NC_007498 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : - Position : 1466968 - 1468452 bp Length : 1485 bp Strand : + Note : - DNA sequence : ATGGAAGAATTAAACGATCTGTTGCTGCAGCGTCGCGCCAAATTGGACGAGTTTCGGGGCGAGGGGGTCAATCCCTACGC CAACGATTTTTGCGTGACTGCTACCTCCGGGGATATTGTCGCAGCCCATGGTGAGCAGGACGGCGCAGCGCTGGAAAATA TCAATCACCACTATGCTCTTGCCGGTCGCATGATGGCTCGTCGTGATTTCGGCAAGGCCGCTTTTATACAGATTCAGGAC CGCCATGGTCGTCTGCAGGTATTCGTTCGTCGTGACAATGTCGGGGAAGAAGCTTTCCAGATGTTCCGCAAGCTCGATAT CGGGGATATTGTCGGGGTGACAGGCAAGCCGTTTCGTACCAAGACCAACGAACTGTCTTTGCGTGCGGACTCCCTTCGTC TGCTGACCAAGTCCTTGCAGCCGCTGCCGGAAAAATGGCATGGCCTGACCGATGTGGAAATGCGCTATCGTCAGCGCTAT CTCGATCTGATCGTAAATCCGGATGTCCAGGAGATATTCAAAAAACGTAGTCAGATCGTCAGTCTTATACGTAATTTCAT GGTGGATAACGACTTTCTCGAAGTCGAGACACCCATGATGCAGCCTGTGGCGGGCGGCGCCACGGCGCGACCGTTTATGA CCCATCATAATACGCTGAAGATGGATCTGTTTCTGCGTATTGCCCCCGAATTGTACCTCAAGCGTCTGGTGGTGGGCGGA TTTGAACGGGTGTTCGAGATCAATCGCAACTTCCGAAACGAAGGGATTTCCATTCAGCATAATCCCGAATTCACCATGAT GGAGTTTTATCAGGCCTACGCTAACTACGAAGACCTGATGGACTTTACCGAAAAGCTCATCTGCCATGTGGCGGAAAAGG TGGTCGGTTCTCTCACCTTTACTTACGGCGGCCGGGAGGTGGATCTGACGGCTCCGTGGGATCGTTTGACCGTCAAGGAA GCGATTCTCAAGTATGGCGATGTCGAACCGGAAGTGCTGGAGGACAAGGATCAGTGTCTGGCCTACGCCCGAAGCCTCGG TCTGGATTTTGACGATACGATCGGTTACGGCAAGCTGTTGACCGAACTTTTTGACGAGGTGGCGGAGCCGAAATTGTGGA ATCCGACCTTTATCACCCAATATCCGACCGAAGTATCCCCGCTTTCGCGCAAAAACGAGGACAATCCCGAGGTGGTCGAT CGCTTTGAGTTGTTTGTCGTCGGTCGCGAATTGGCCAACGCCTTTTCCGAGCTCAACGATCCGATTGATCAGAAAGATCG CTTTGCCAAGCAGCTGTTGGAGAAGGAAGCCGGCGACGATGAAGCGCATGCCATGGACGAAGACTACATCCGTGCCCTGG AGTACGGATTGCCTCCCACCGCAGGTGAAGGCATCGGTATCGATCGGCTGGTCATGCTGCTGACCGATGCAGCGTCGATC CGGGAGGTCATCCTGTTTCCTCAATTGCGTCCTGAAGCCAAATAA Protein sequence : MEELNDLLLQRRAKLDEFRGEGVNPYANDFCVTATSGDIVAAHGEQDGAALENINHHYALAGRMMARRDFGKAAFIQIQD RHGRLQVFVRRDNVGEEAFQMFRKLDIGDIVGVTGKPFRTKTNELSLRADSLRLLTKSLQPLPEKWHGLTDVEMRYRQRY LDLIVNPDVQEIFKKRSQIVSLIRNFMVDNDFLEVETPMMQPVAGGATARPFMTHHNTLKMDLFLRIAPELYLKRLVVGG FERVFEINRNFRNEGISIQHNPEFTMMEFYQAYANYEDLMDFTEKLICHVAEKVVGSLTFTYGGREVDLTAPWDRLTVKE AILKYGDVEPEVLEDKDQCLAYARSLGLDFDDTIGYGKLLTELFDEVAEPKLWNPTFITQYPTEVSPLSRKNEDNPEVVD RFELFVVGRELANAFSELNDPIDQKDRFAKQLLEKEAGDDEAHAMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDAASI REVILFPQLRPEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-123 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006716966.1 | lysyl-tRNA ligase | VFG1668 | Protein | 5e-123 | 53 |
