Gene Information

Name : RSP_3602 (RSP_3602)
Accession : REF_jgi:RSP_3602
Strain :
Genome accession: NC_007494
Putative virulence/resistance : Resistance
Product : ABC efflux transporter, ATPase subunit
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 695129 - 695818 bp
Length : 690 bp
Strand : +
Note : IMG reference gene:2512957115; PFAM: ABC transporter

DNA sequence : 
ATGAGCGAGACGATCCTGGCGCTGAGGGACGCGCGGCTGACGTTGGCGGGAAACGCAGGCCCGGTCGAGATCCTGAAGGG
GATCAGTCTGGACGTGCGGCGCGGCGAGACGCTGGGGCTCGTGGGGCCTTCGGGATCGGGCAAGTCGTCGCTCCTGATGC
TGATGGGCGGGCTGGAGCGCGCCACCGGCGGCACGGTCACGGCGCTGGGCCAGGACCTGACGGCGATGGACGAGGACCAG
CTCGCGCGGTTCCGCCGGGGGAATATGGGCGTCGTCTTCCAGTCTTTCCACCTCATCCCCACGATGACGGCACTTGAAAA
TGTCGCGATCCCGCTGGAGCTTGCCGGCGCGCCCGACGCCTTCGACCGCGCCGAGGCCGAGCTGCGCGCCGTGGGGCTCG
GGCCCCGGATCGACCATTATCCCTCGCAGATGTCGGGGGGCGAGCAGCAGCGGGTGGCGCTCGCGCGTGCCGCGGCGCCC
CGGCCCGCGATCCTTCTGGCCGACGAGCCGACGGGCAATCTCGACGGGGTGAACGGGGCCGCGATCATGGATCTCCTCTT
CGGGCTGCGCGACCGGCACGGGGCGACGCTGGTCCTCGTGACCCATGCGCCCGAACTTGCCGCGCGCTGCGACCGGGTGG
TGCGGCTCGCCGACGGGCGCATCGCAGGCGAGGAGCGCAAGGCGGCATGA

Protein sequence : 
MSETILALRDARLTLAGNAGPVEILKGISLDVRRGETLGLVGPSGSGKSSLLMLMGGLERATGGTVTALGQDLTAMDEDQ
LARFRRGNMGVVFQSFHLIPTMTALENVAIPLELAGAPDAFDRAEAELRAVGLGPRIDHYPSQMSGGEQQRVALARAAAP
RPAILLADEPTGNLDGVNGAAIMDLLFGLRDRHGATLVLVTHAPELAARCDRVVRLADGRIAGEERKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-14 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-16 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-16 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-16 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3602 REF_jgi:RSP_3602 ABC efflux transporter, ATPase subunit NC_008702.1.4606598. Protein 2e-22 45
RSP_3602 REF_jgi:RSP_3602 ABC efflux transporter, ATPase subunit NC_012469.1.7686878. Protein 1e-22 45