Gene Information

Name : RSP_3533 (RSP_3533)
Accession : REF_jgi:RSP_3533
Strain :
Genome accession: NC_007494
Putative virulence/resistance : Virulence
Product : gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 614038 - 615525 bp
Length : 1488 bp
Strand : -
Note : IMG reference gene:2512957044; PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGCTGCAAGAGATCGACTGGCACGCCCGCGCCAAAGCCGTGGCCCTTCCGAACCGTCCCTTCATCGACGGCCAGTATGT
CGACAGCCTGTCGGGCGAGACCTTCGCCTGCATCTATCCCGGCGACGGGCGGCCGCTGACCGATGTGGCCTCGTGCAATG
CGGCGGATGTGGATGTCGCGGTGCGGTCGGCCCGCAAGGCGTTCGAGGCGGGGGTCTGGTCGCGGATGGCCCCGGCCGAC
CGGCGCCGCATCCTGCTGCGCTTCTCCGAGCTGATCCTCGCCAACCGGGAGGAGCTGGCGCTCCTCGAGACGCTGAACGT
GGGCAAGCCCATCGCCAATGCCTACAACGGCGACGTGGTGAGCGCTGCCGCCTGCATCGCCTGGTATGCCGAGGCGATCG
ACAAGGTCTATGGCGAGGTGGCGGCCACGGCTTACGACATGACGACGCTCGTCATGCGCGAGCCCTTGGGGATCGTGGCG
GCCGTGGTGCCGTGGAACTATCCGATGTCGATGGCCGCCTGGAAGCTCGGGCCTGCGCTTGCCACCGGCAATTCGGTGAT
CCTGAAGCCCGCCGAACAATCGCCCTTCACCGCGCTGAAGTTCGGCGAGCTCGCCATCGAGGCGGGGATGCCTCCGGGGG
TGCTGAACGTGGTGCCGGGCCTCGGCCATATCGCGGGCAAGGCGCTCGGGCTGCATATGGATGTCGATTGCGTGGGCTTC
ACCGGCTCGACCGAGGTCGGCAAGTATTTCATGCAGTATTCCGGCCAGTCGAACATCAAGCGGATCGGGCTCGAACTCGG
CGGCAAGTCACCTCAGGTCGTGCTGGCGGATTGCGATGATCTCGATGCGGCGGCGGCCGGGATTGCGGCCGGCATCTTCG
CCAACACCGGGCAGGTCTGCAACGCGGGCTCGCGCCTGATCGTGGACGAGAAGATCCACGACCAGCTCCTCGAGAAGATC
GCGGCTCAGGCCAAGGTCTTCGCGCCCGGCGATCCGCTCGACACCGCCACCCGCATGGGCTCGATGGTGAGCGAAGAGCA
GATGGACCGCGTGCTGGGCTACATCGACGCCGGCCGCGCGGACGGTGCACGTCCGGTCATCGGCGGCGGCCGGGTGAAGA
CCGAAACCGGCGGCTTCTACATCGAACCCACGATCTTCGAGGGCGTGCGCAACGACATGAAGATCGCGCAGGAAGAGATC
TTCGGGCCGGTGCTGTCGGCCATCCCGGTGAAGGGCTTCGACGAGGCGATGGCGACGGCCAATGACACGGTCTACGGGCT
CGCGGGCGCGGTCTGGACCGGGTCGGTGAAGAACGCGCACCGGGCGGCCAAGTCGCTCCGCGCGGGCGTGGTCTGGGTCA
ACTGCTTCGACCGCGGCTCGCTCGCCGTGCCGTTCGGCGGCTTCAAGCAATCGGGCTTCGGCCGGGACAAGTCGCTGCAT
GCGATGGATAAATACACCGACCTGAAGGCCGTCTGGTTCGCCCACTGA

Protein sequence :
MLQEIDWHARAKAVALPNRPFIDGQYVDSLSGETFACIYPGDGRPLTDVASCNAADVDVAVRSARKAFEAGVWSRMAPAD
RRRILLRFSELILANREELALLETLNVGKPIANAYNGDVVSAAACIAWYAEAIDKVYGEVAATAYDMTTLVMREPLGIVA
AVVPWNYPMSMAAWKLGPALATGNSVILKPAEQSPFTALKFGELAIEAGMPPGVLNVVPGLGHIAGKALGLHMDVDCVGF
TGSTEVGKYFMQYSGQSNIKRIGLELGGKSPQVVLADCDDLDAAAAGIAAGIFANTGQVCNAGSRLIVDEKIHDQLLEKI
AAQAKVFAPGDPLDTATRMGSMVSEEQMDRVLGYIDAGRADGARPVIGGGRVKTETGGFYIEPTIFEGVRNDMKIAQEEI
FGPVLSAIPVKGFDEAMATANDTVYGLAGAVWTGSVKNAHRAAKSLRAGVVWVNCFDRGSLAVPFGGFKQSGFGRDKSLH
AMDKYTDLKAVWFAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-114 54
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-67 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-69 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-69 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-69 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-68 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3533 REF_jgi:RSP_3533 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase VFG0082 Protein 6e-68 41