Gene Information

Name : RSP_3511 (RSP_3511)
Accession : REF_jgi:RSP_3511
Strain :
Genome accession: NC_007494
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 589759 - 590421 bp
Length : 663 bp
Strand : +
Note : IMG reference gene:2512957022; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGCGCGCTGGTGGTCGAGGATGATGCGCGGATCGCGCAGGATCTGAGCGTCGCGCTCGGCTCGGCCGGCTTCAGGGT
CGAGACGGCCGCAGACGGCGAGACCGCGTGGTTTCTGGGCGGGACAGAGGGCTACGATCTGATCGTGCTCGACCTCGGCC
TGCCGAAGCTCGATGGCCTCGCCGTGCTGAAGCGATGGCGGGCGGAAGGCGTGGAGATCCCGGTGCTGGTGCTGACGGCG
CGGGGCACCTGGACCGAGCGCGTGGAAGGCATCGATGCGGGGGCCGACGACTATCTGCCCAAGCCCTTCCGGATCGAGGA
ACTGGTCGCCCGCGCCCGGGCGCTCGTGCGCCGCTCGACCGGCCGGGCCGCGCCCCTGCAGAGCGTGGGGCGGCTCGCGC
TCGACATGAACCGCATGACCGCGACCCTCGACGGCCTGCCGCTCGGCCTCGCACCGCTGGAGTTCCGCCTGCTGGCCTAT
CTGATGCTGCACCGAGACAGGGTCGTGCCGCCGACCGAGCTTCTCGAACATCTTTACGGCGACAACGATGCCCGCGAGGC
GAATGCCCTCGAAGCGGTGGTGGCGCGACTGCGCCGCAAGGTCGGGCGCGGCGTCATAGGCACGCGGCGCGGCTTCGGCT
ACCAGCTCGAAGCGGGCCCGTGA

Protein sequence : 
MRALVVEDDARIAQDLSVALGSAGFRVETAADGETAWFLGGTEGYDLIVLDLGLPKLDGLAVLKRWRAEGVEIPVLVLTA
RGTWTERVEGIDAGADDYLPKPFRIEELVARARALVRRSTGRAAPLQSVGRLALDMNRMTATLDGLPLGLAPLEFRLLAY
LMLHRDRVVPPTELLEHLYGDNDAREANALEAVVARLRRKVGRGVIGTRRGFGYQLEAGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-23 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3511 REF_jgi:RSP_3511 two component transcriptional regulator, winged helix family NC_002516.2.879194.p Protein 1e-37 45
RSP_3511 REF_jgi:RSP_3511 two component transcriptional regulator, winged helix family BAC0487 Protein 1e-30 44
RSP_3511 REF_jgi:RSP_3511 two component transcriptional regulator, winged helix family CP000647.1.gene1136. Protein 5e-36 41
RSP_3511 REF_jgi:RSP_3511 two component transcriptional regulator, winged helix family BAC0530 Protein 6e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3511 REF_jgi:RSP_3511 two component transcriptional regulator, winged helix family VFG0473 Protein 2e-28 43
RSP_3511 REF_jgi:RSP_3511 two component transcriptional regulator, winged helix family VFG1390 Protein 4e-22 41