Gene Information

Name : RSP_3414 (RSP_3414)
Accession : REF_jgi:RSP_3414
Strain :
Genome accession: NC_007494
Putative virulence/resistance : Virulence
Product : ABC Fe+3-siderophore transporter, inner membrane subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 480316 - 481356 bp
Length : 1041 bp
Strand : -
Note : IMG reference gene:2512956924; PFAM: FecCD transport family

DNA sequence :
GTGACCCCCGCACCTTCCCTTGCCGCCGAGGTCGCGGCCCACCGTCGCCGTCGCCTGCGCCGGGGCGCAGCCCTCGTGCT
CGGCCTCGTCCTCCTGATCCTCGCATCCGTGGCGGTGACGCTCTCGGTCGGCTCGACGCCCGTGGCGCCGTTCGACGTGC
TCCGCGTGCTGGCCGGGCAGGAGGTGCCGGGGGCCTCCTTCACCGTCGAGCGGCTGCGGCTGCCGCGCGCGGTGCTGTCC
CTTCTGGCCGGCCTCTGCTTCGGCTTGGGCGGCGCCGCCTGCCAGACCCTGCTCCGCAGCCCGCTGGCCAGCCCCGACAT
CATCGGCATCTCGGCAGGCAGCGGGGCCGCCGCCGTCTTCGCTATTGTGGTCCTGGGCTGGAGCGGGCCTGCCGTCTCGG
GCGCAGCCATCCTCTGCGGGCTCGCCACCGCGCTTGCGATCTATCTCCTGGCCTGGCGGGACGGGGTGGCGGGCGCGCGG
CTGATCCTCGTGGGGATCGGGATCTCGGCCATGCTGCAGAGCGTGACCGCCTATCTCCTCCTGCGCGCCCCGGACTGGAG
CCTGCAGGAGGCGCTGCGCTGGATGACAGGCAGCGTGAACGGCGCCCGGCTGTCGGACGCACCGCCCCTCCTGCTGGCGC
TCGCCCTGTTCGGAACCCTCCTCCTGTGCCGGAGCCGCGAGCTCGAGGCCCTGCGGCTCGGCGACGACAAGGCGGCGGCG
CTCGGCGTGCGGATCGCGCGGACGCGGCTTCTGATCCTCGTGGGCGTGGTCGGGCTGATCGCGGTGGCGACCGCCGTCGC
GGGCCCCATCGCCTTCGTGGCCTTCCTCGCAGGCCCCATCGCCGCGCGTCTGGGCATGCCGGGTCGGCCGATCCTGCTGC
CGGCCGCGCTGATCGGCGCGCTTCTCGTTCTTCTGGCCGATTTCGCAGGGCAGGTGCTTCTGCCCGGCCGCTATCCGGTC
GGAATCGTCACTGGCGCCCTCGGCGCGCCTTACCTCATCTATCTCATCGTCCGGGTGAACCGGGCCGGAGGCACCATATG
A

Protein sequence :
MTPAPSLAAEVAAHRRRRLRRGAALVLGLVLLILASVAVTLSVGSTPVAPFDVLRVLAGQEVPGASFTVERLRLPRAVLS
LLAGLCFGLGGAACQTLLRSPLASPDIIGISAGSGAAAVFAIVVLGWSGPAVSGAAILCGLATALAIYLLAWRDGVAGAR
LILVGIGISAMLQSVTAYLLLRAPDWSLQEALRWMTGSVNGARLSDAPPLLLALALFGTLLLCRSRELEALRLGDDKAAA
LGVRIARTRLLILVGVVGLIAVATAVAGPIAFVAFLAGPIAARLGMPGRPILLPAALIGALLVLLADFAGQVLLPGRYPV
GIVTGALGAPYLIYLIVRVNRAGGTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1034 NP_345509.1 iron ABC transporter permease Virulence PPI-1 Protein 2e-28 45
SPN23F_09550 YP_002510938.1 ferric enterobactin transport protein Virulence PPI-1 Protein 2e-28 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3414 REF_jgi:RSP_3414 ABC Fe+3-siderophore transporter, inner membrane subunit VFG0928 Protein 4e-14 41