Gene Information

Name : RSP_3088 (RSP_3088)
Accession : REF_jgi:RSP_3088
Strain :
Genome accession: NC_007494
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 133431 - 134090 bp
Length : 660 bp
Strand : -
Note : IMG reference gene:2512956590; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGCGTATCCTGCTCGTCGAGGATGACCCCGGCCTGGGTGGGGCCATCCGCGACCAGATCAGCGCCGAGGGCCATGCGGC
AGACTGGATGACGGGCGTCGAGGATGCCCTGGCCTCGGTCGCGACCACGGCCTACGATCTCGTGCTGCTCGACCTGAACC
TGCCCGACGGGAGCGGGCTCGACTTCCTGCGCGGGCTCCGCGCCCGGAAGGAGACCATGCCCGTCATCATCCTCACGGCG
CGCGACCGGGTGACGGAGCGGATCGCGGGGCTGAATGCGGGCGCCGACGATTACATGGTCAAGCCGTTCGACCTTTCCGA
ACTGTCCGCCCGGATCGGTGCCGTCTCGCGGCGCTATGCCGGCAATCCCAGCCCGCGCCTCGCGCTCGGCCCGCTGGAGG
TCGACATCGCCGACCGGCGGATCGACGGGCCCGAGGGCGAGGTCACGCTCTCGCAGCGCGAATGGGCGATCTTCGAGGCG
CTCGTGAAGCGGCCGGGATCGGTCGTCTCGAAGACCCAGCTCGAGGAAACGCTCTACGCCTTCGACGCCGAGGTCGAAAG
CAACACGATCGAGGTCTATGTCAGCCGCCTGCGCAAGAAGCTCGGGCGCGACCGGATCGAGACGCGGCGCGGCATGGGCT
ACCGGCTGGTGCGGGAATGA

Protein sequence : 
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLLDLNLPDGSGLDFLRGLRARKETMPVIILTA
RDRVTERIAGLNAGADDYMVKPFDLSELSARIGAVSRRYAGNPSPRLALGPLEVDIADRRIDGPEGEVTLSQREWAIFEA
LVKRPGSVVSKTQLEETLYAFDAEVESNTIEVYVSRLRKKLGRDRIETRRGMGYRLVRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3088 REF_jgi:RSP_3088 two component transcriptional regulator, winged helix family NC_002516.2.879194.p Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_3088 REF_jgi:RSP_3088 two component transcriptional regulator, winged helix family VFG0473 Protein 3e-36 43