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Name : RSP_1478 (RSP_1478) Accession : REF_jgi:RSP_1478 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : ABC oligopeptide transporter, fused ATPase subunits Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 63407 - 65026 bp Length : 1620 bp Strand : - Note : IMG reference gene:2512953371; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region DNA sequence : ATGGAGCCCGTTCTCGATGTGAAGGGCCTCCGGGTCGCCTTCCAGACCAATGACGGCGAGGTTCAGGCCGTGCGCGGGAT CGACCTCTCGGTGATGCCCGGCGAAACCGTGGCCATCGTGGGCGAATCCGGCTCGGGCAAGAGCCAGACCACCATGGCGC TGATGGGGCTTCTGGCGCAGAACGGCCGGGCCACCGGCTCGGCCCTCTACCGCGGGCGCGAGCTTATCGGCCTGTCCGAG CGCGAGCTGAACAAGGTGCGCGGCGACAAGATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCGACCCGCTCTACCG GATCGGCGACCAGCTGGCCGAGCCGCTGCGCTTCCACCGCGGGCTCTCGAAGCGCGAGGCGCGGCCCCGGATCGTCGAGC TTTTGCGCCTCGTGGGCATCCCCGAGCCCGAGCGGCGGATCGACAGCTATCCGCACGAACTGTCGGGCGGGCAGCGCCAG CGGGTGATGATCGCCATGGCGCTCGCCTGCGATCCCGACATCCTGATCGCCGACGAGCCCACCACCGCGCTCGACGTGAC GATTCAGGCGCAGATCCTGACCCTGCTCGCCGATCTGCAGAAGCGGCTCGGCATGGCGATCCTCTTCATCACCCATGACC TCGGCATCGTGCAGCGCTTCGCCGACCGGGTCTATGTGATGCAGGCGGGCGAGGTGGTCGAGACCGGCGAGACCGCGGCG CTGTTCGAGGCGCCGTCGCATCCCTACACGCGGATGCTGCTCGATGCCGAGCCCGAGGGGACGAAGGCGCCGCCGCCCGA GACGGCGCCGGTGCTGATGGAGGGCCGCAACGTCGAGGTGGTCTTCTCGAGCGGCGGCGGCCTCTTCGAGGCGCCGAACG AGCTGCGCGCCGTGGACGGCGTGTCGGTCCGGCTGCGGCAGGGCCAGACCATCGGGGTGGTGGGCGAATCCGGGTCGGGC AAGTCCACCCTCGGGCGCGCGCTCCTGCGGCTCCTGCCCTCGGCGGGCCTTGTGACCTTCGAGGGGCGCGAGCTCGCCCG CGATGCGGCCGAGATGCGCCCGCTGCGACGCCGGATGCAGCTCGTCTTCCAGGATCCGTTCGGCTCGCTCTCGCCGCGGA TGACCGTGGGGCGGATCATCACCGAAGGCCTCAAGATCCACGAGCCGGACCTTTCCACCCGCGAGCGCGACCGCCGCGCG GGCGCGGCGCTGGCCGAGGTGGGCCTCAGCCCCGCGATGCGCAACCGCTACCCGCACGAGTTTTCAGGCGGCCAGCGCCA GCGCATCGCCATCGCTCGGTCGATGATCCTGAAGCCCAGGGTGATTGTTCTGGACGAGCCGACCTCGGCCCTCGACCGGT CGGTGCAGAAGCAGATCGTGGACCTGCTGCGCGACCTGCAGGCGCGGCACGGGCTCTCCTACCTCTTCATCAGCCACGAC CTCGCCGTAGTCCGGGCGCTGGCCGACTATATCCTCGTGATGAAGGAGGGCCGCATCGTCGAGGAGGGCCAGACCGCCGA CATCTTCGACCGTCCGCAGGAGGCCTACACCCGGACGCTCATGGCCGCCGCGCTCGAGACGCGGCGCTTTCGCGAGGAGG CGGAACGGACGAGCGTCTGA Protein sequence : MEPVLDVKGLRVAFQTNDGEVQAVRGIDLSVMPGETVAIVGESGSGKSQTTMALMGLLAQNGRATGSALYRGRELIGLSE RELNKVRGDKITMIFQEPMTSLDPLYRIGDQLAEPLRFHRGLSKREARPRIVELLRLVGIPEPERRIDSYPHELSGGQRQ RVMIAMALACDPDILIADEPTTALDVTIQAQILTLLADLQKRLGMAILFITHDLGIVQRFADRVYVMQAGEVVETGETAA LFEAPSHPYTRMLLDAEPEGTKAPPPETAPVLMEGRNVEVVFSSGGGLFEAPNELRAVDGVSVRLRQGQTIGVVGESGSG KSTLGRALLRLLPSAGLVTFEGRELARDAAEMRPLRRRMQLVFQDPFGSLSPRMTVGRIITEGLKIHEPDLSTRERDRRA GAALAEVGLSPAMRNRYPHEFSGGQRQRIAIARSMILKPRVIVLDEPTSALDRSVQKQIVDLLRDLQARHGLSYLFISHD LAVVRALADYILVMKEGRIVEEGQTADIFDRPQEAYTRTLMAAALETRRFREEAERTSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 9e-86 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-110 | 44 |
