Gene Information

Name : RSP_1790 (RSP_1790)
Accession : REF_jgi:RSP_1790
Strain :
Genome accession: NC_007493
Putative virulence/resistance : Resistance
Product : putative transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 376480 - 376905 bp
Length : 426 bp
Strand : -
Note : IMG reference gene:2512953697; PFAM: MerR family regulatory protein; MerR, DNA binding

DNA sequence : 
ATGCTCACGATCGGGAAACTGGCAGAGGCGGCCGGCGTGAAGGTGCCGACGATCCGCTATTACGAGCAGATCGGGCTGCT
GCCGCCGCCCGAGCGCAGCGCGGGCAACCAGCGGCTCTACGGACACCGGGCGGAGGAGCGTCTGGCCTTCATCCGCCACG
CGCGCGATCTGGGCTTCCCGCTCGAGGCGATCCGGGATCTCCTGAGCCTGTCGGACCGGCCCGACCAGTCCTGCGAGGCG
GCCGACGCCATCGCGCGGGCGCAACTCTCCGCGGTGCGGGCGCGGATCGGGCGGCTGCGCGCGCTCGAGGCGGAGCTCGA
GCGCATGATCGGCCAGTGCGCCCATGGCACGATCGCCGATTGCCGGGTGATCGAAGTGCTGGGCGATCATGCCCACTGCG
CGCACGAGCACCGGAAGGAGCCCTGA

Protein sequence : 
MLTIGKLAEAAGVKVPTIRYYEQIGLLPPPERSAGNQRLYGHRAEERLAFIRHARDLGFPLEAIRDLLSLSDRPDQSCEA
ADAIARAQLSAVRARIGRLRALEAELERMIGQCAHGTIADCRVIEVLGDHAHCAHEHRKEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-21 41
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 2e-19 41
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 5e-19 41
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 4e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_1790 REF_jgi:RSP_1790 putative transcriptional regulator BAC0058 Protein 3e-22 43
RSP_1790 REF_jgi:RSP_1790 putative transcriptional regulator BAC0688 Protein 3e-19 41