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Name : kdpB (RSP_1266) Accession : REF_jgi:RSP_1266 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : Potassium-transporting P-type ATPase, B chain, KdpB Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 3032780 - 3034807 bp Length : 2028 bp Strand : + Note : IMG reference gene:2512956310; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC DNA sequence : ATGTCCCGACATCCCAGACCCGAGGCACGGCTCGCAACCCTTGCGCCCGCAGCCCTCCGGCAGTCCTTCGTCAAGCTCGA CCCGCGCAGCCTGTCGCGCAACCCGGTGATCTTCACCACGGCCGTGGTGGCGGGCCTGACCACCGTTCTCGCCCTCCCGG CGCTGGCGACCGACCTGTCCCGCGGCCTCACGGCGCTGCATATCTCGGCCTGGCTCTGGATCGCGGTGCTGTTCGCGAAT TTCGCCGAGGCGCTGGCCGAGGGCCGGGGCCGGGCCCGCGCCGACAGCCTGCGCGCAAGCCGCTCCGAGACGCCGGTCAA GCTTCTCGCCTCGGCCGAGGCCGCGCCCGCGAGCGCGACGCTCGTGCCCTCGGCGGGGCTCCGGAAGGGCCAGATCCTGC TCGTCGAGGCGGGCGACCTGATCCCGGCCGATGCCGAGGTGATCCGCGGCGTGGCCTCGGTGGACGAGAGCGCCATCACC GGCGAGAGCGCGCCCGTGATCCGCGAGAGCGGCGGCGACCGGTCGTCGGTGACGGGCGGCACGCGCATCGTCTCGGACAG TCTCGTGCTGCGCGTCACCGCCGATCCGGGGCGCAGCTTCCTCGACCGGATGATCGCGCTGGTCGAAGGGGCCGAGCGCA AGAAGACCCCGAACGAGATCGCGCTGAACATCCTGCTCGCGGGGCTCACGCTGATCTTCCTGATCGTGGTCGTGACGCTC GAGCCTTTCGCGCGCTTCTCGGGTGCGACCATCCCGGTCGTGTTCCTCGCGGCGCTCTTCGTCACGCTCATCCCCACCAC CATCGGCGGCCTGCTTTCGGCCATCGGCATCGCGGGGATGGACCGGCTGGTGAAGGCCAATGTCATCGCCAAGTCGGGCC GTGCGGTCGAGGCGGCGGGCGACGTGGACACGCTTCTGCTCGACAAGACCGGCACGATCACCTTCGGCAACCGCATGGCC GACCGGTTCGTGCCGGCCGAGGGCGTGAGCCTGCGCGAGCTGGCCGACCGCGCCATGCTGGCCTCGCTCGCCGACGAGAC GCCCGAGGGCAAGTCCATCGTCGAGCTGGCGCGCGCTCAGGGGGCCACGGCGGTGCCCGAGGGGCAGGCCGTGGCCTTCT CGGCCCAGACGCGGCTTTCGGGCGTGGATCTGGGCGAGGTCGCGCTGCGCAAGGGGGCGGTCGATGCCGTCCTGCGCCAC ACGGGCCGGGTGCCCGATGCGCGGGTCGCGGCCGAGGTCGAGGCCATCGCCCGGTCGGGCGGCACGCCGCTGCTCGTCTC GGAAGGCAACCGGATCCTCGGCGCGATCCATCTGAAGGATGTGGTGAAGCCCGGTGTGCGTGCCCGCTTCGCCGACCTGC GCCGCATGGGGATCCGCACGGTGATGATCACGGGCGACAACCCCCTGACCGCCGCCGCCATCGCGGCCGAGGCCGGGGTC GACGATTTCCTCGCCGAGGCCACGCCCGAGATGAAGCTCGACTACATCCGGCGCGAACAGGCGCAGGGCCGGATGGTCGC CATGTGCGGCGACGGCTCGAACGACGCCCCGGCGCTGGCGCAGGCCGATGTGGGCGTGGCGATGAATTCGGGCACGCCCG CCGCCAAGGAGGCCGCGAACCTGATCGACCTCGACAGCGACCCCACCAAGCTCATCGAGGTGGTGATGGTGGGCAAGGAG CTGCTCATCAGCCGCGGCGCCCTCACCACCTTTTCGGTGGCCAACGATGTGGCGAAATATTTCGCCATCCTGCCGGCCAT GTTCGTGGCGGCCTATCCGGGCCTTCAGGCGCTGAACATCATGCGTCTGGCCAGCCCCGAAAGCGCGATCCTCTCGGCCG TGATCTTCAACGCGCTGGTGATCGTGGCGCTGATCCCGCTCGCGCTGCGCGGGGTGGGTTATGCGCCCGCCTCGGCTGCG GCCCTGTTGCGGCGCAATCTGACGATCTATGGTCTGGGCGGACTGGTCGTGCCGTTCGTGGGGATCAAGATCATCGACAT GGGCCTCGTGGCCCTCGGCCTCGCCTGA Protein sequence : MSRHPRPEARLATLAPAALRQSFVKLDPRSLSRNPVIFTTAVVAGLTTVLALPALATDLSRGLTALHISAWLWIAVLFAN FAEALAEGRGRARADSLRASRSETPVKLLASAEAAPASATLVPSAGLRKGQILLVEAGDLIPADAEVIRGVASVDESAIT GESAPVIRESGGDRSSVTGGTRIVSDSLVLRVTADPGRSFLDRMIALVEGAERKKTPNEIALNILLAGLTLIFLIVVVTL EPFARFSGATIPVVFLAALFVTLIPTTIGGLLSAIGIAGMDRLVKANVIAKSGRAVEAAGDVDTLLLDKTGTITFGNRMA DRFVPAEGVSLRELADRAMLASLADETPEGKSIVELARAQGATAVPEGQAVAFSAQTRLSGVDLGEVALRKGAVDAVLRH TGRVPDARVAAEVEAIARSGGTPLLVSEGNRILGAIHLKDVVKPGVRARFADLRRMGIRTVMITGDNPLTAAAIAAEAGV DDFLAEATPEMKLDYIRREQAQGRMVAMCGDGSNDAPALAQADVGVAMNSGTPAAKEAANLIDLDSDPTKLIEVVMVGKE LLISRGALTTFSVANDVAKYFAILPAMFVAAYPGLQALNIMRLASPESAILSAVIFNALVIVALIPLALRGVGYAPASAA ALLRRNLTIYGLGGLVVPFVGIKIIDMGLVALGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-119 | 60 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-118 | 59 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-118 | 59 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-118 | 59 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-118 | 59 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-118 | 59 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-129 | 57 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-129 | 57 |
