|
Name : gabD4 (RSP_1012) Accession : REF_jgi:RSP_1012 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 2770508 - 2771986 bp Length : 1479 bp Strand : + Note : IMG reference gene:2512956050; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase; truncated by 19 aa DNA sequence : ATGCTCGACTCCGTCACCGACCTGCGCTCGCTGCTCAAGGACCCGTCGCTGCTCGAAACCCGCGCCTTCGTGGCCGGCGA GTGGGTCGATGCCGACGACGGCGCAACCTTCGAGGTGACGAACCCCGCCCGCGGAGACGTGATCTGCACGGTGCCCGACC TCGGCCGGGCCGAGACGGCGCGCGCCATCGCCGCCGCCGAGGAGGCCATGAAGGAGTGGGCCGCCCGCACCGGCAAGGAG CGCGCGCAGGTCATGCGCAAGTGGTTCGACCTGATGATGGCGAACCAGGACGACCTCGGCGCGATCCTCACCGCCGAGAT GGGCAAGCCGCTCGCCGAGGCGAAGGGCGAGATCGCCTACGGCGCCTCGTTCATCGAGTGGTTCGGCGAAGAGGCCAAGC GCATCTATGGCGAGACCATCCCCGGCCACATGCGCGACAAGCGCATCACGGTTCTGAAGCAGCCGATCGGCGTCGTGGGC TCGATTACGCCGTGGAACTTCCCGAACGCCATGATCACCCGCAAATGCGGGCCCGCGCTGGCGGCGGGCTGCGGCTTCGT CGCCCGCCCCGCGGCCGAGACGCCGCTCTCGGCGCTGGCGCTCGCCGTGCTGGGCGAGCGGGCCGGGCTGCCCAAGGGCA TCCTCTCGGTCATCACCTCGAGCCGCTCCTCGGACATCGGCAAGGAGATGTGCGAGAACCCGATCGTCCGCAAGCTCACC TTCACCGGCTCGACCGAGGTGGGCCGCATCCTGCTGCGGCAGGCGGCCGATCAGGTGATGAAATGCTCGATGGAGCTCGG CGGCAACGCGCCCTTCATCGTCTTCGACGATGCCGATCTCGACGCCGCGGTGCAGGGCGCCATGGCCTCGAAGTTCCGCA ACAACGGCCAGACCTGCGTCTGCGCGAACCGGATCTACGTCCAGTCGGGCGTCTATGACGCCTTCGCCGAAAAGCTCGCC GCCGCCGTGAAGAAGCTGAAGGTGGGCGACGGGCTCGTCGAAGGCACCGAGGCCGGCCCGCTCATCAACGAGAAGGCGGT GGCCAAGGTCGAGGAACATATCCGCGACGTGCTCGACGGCGGCGGTCAGGTGCTGACCGGCGGCAAGCGCCACGCGCTCG GCGGCACCTTCTTCGAGCCGACGGTCGTGACCGGCGTGAAGCAGGAGATGAAGGTTTCGACGGAAGAGACCTTCGGCCCG CTCGCCCCCCTCTTCCGCTTCGAAACCGAGGATGAGGCGGTGGGCTACGCCAACGACACGATCTTCGGCCTCGCCTCCTA CTTCTATGCGCGCGACGTGGGCCGCATCACCCGCGTGCAGGAGGCGCTGGAATATGGCATCGTGGGCGTGAATACCGGCA TCATCTCGACCGAGGTGGCCCCCTTCGGCGGCGTGAAGCAATCCGGCCTCGGCCGCGAGGGCTCGCGCCACGGGATCGAG GATTACCTCGAGATGAAATACATCTGCCTCTCGATCTGA Protein sequence : MLDSVTDLRSLLKDPSLLETRAFVAGEWVDADDGATFEVTNPARGDVICTVPDLGRAETARAIAAAEEAMKEWAARTGKE RAQVMRKWFDLMMANQDDLGAILTAEMGKPLAEAKGEIAYGASFIEWFGEEAKRIYGETIPGHMRDKRITVLKQPIGVVG SITPWNFPNAMITRKCGPALAAGCGFVARPAAETPLSALALAVLGERAGLPKGILSVITSSRSSDIGKEMCENPIVRKLT FTGSTEVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVQGAMASKFRNNGQTCVCANRIYVQSGVYDAFAEKLA AAVKKLKVGDGLVEGTEAGPLINEKAVAKVEEHIRDVLDGGGQVLTGGKRHALGGTFFEPTVVTGVKQEMKVSTEETFGP LAPLFRFETEDEAVGYANDTIFGLASYFYARDVGRITRVQEALEYGIVGVNTGIISTEVAPFGGVKQSGLGREGSRHGIE DYLEMKYICLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-139 | 64 |
