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Name : RSP_0962 (RSP_0962) Accession : REF_jgi:RSP_0962 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : Dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 2721268 - 2722656 bp Length : 1389 bp Strand : - Note : IMG reference gene:2512955999; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase DNA sequence : ATGGCAACTTTCGACGTCATCATCATCGGCGCGGGCCCCGGCGGCTATGTCTCCGCCATCCGCTGCGCCCAGCTCGGGCT GAAGACCGCCGTGGTCGAGGGCCGCGAGGCGCTGGGCGGCACCTGCCTCAACGTGGGCTGCATCCCCTCGAAGGCGCTGC TGCACGCGACCCACAACCTGCATGAAGTCCACGAGAATTTCGAGAAGATGGGCCTGATGGGCGCCCATCCGACCGTCGAC TGGTCGAAGATGCAGGGCTACAAGCAGGAGGTCGTCGACGGCAACACCAAGGGCATCGAGTTCCTCTTCAAGAAGAACAA GATCACCTGGCTCAAGGGCTGGGGCTCGATCCCCGAGCCGGGCAAGGTGAAGGTGGGCGAGGAGATCCACGAGGCCAAGT CCATCGTGATCGCCACCGGCTCCGAGCCCGCGAGCCTGCCGGGCGTCGAGGCCGACGAGTCGGTGATCGTGACCTCGACC GGCGCCCTCAGCCTCGGCAGGATCCCCGAGACCATGGTGGTGATCGGCGCGGGCGTCATCGGGCTCGAGCTCGGCTCGGT CTATGCCCGGCTCGGCACCAAGGTGACGGTCGTCGAATATATGGAGGCGATCCTGCCCGGCATGGATGCCGAGGTGGTCA AGACCACCCAGCGCATCCTCGCCAAGCAGGGGCTGAGCTTCGTCCTCGGCGCGGCCGTCAAGGGCGCGACGGTGTCCGAC GGCAAGGCAACCGTCACCTGGGCCGCGAAGAAGGACGGCAAGGAAACCAGCCTCACCGTCGATACGGTGCTGGTGGCGAC GGGCCGCAAACCCTTCACCGAAGGGCTCGGGCTCGAGGCTCTGGGCGTCGAGATGCTGCCGCGGGGCGTGGTGAAGATCG ACGACCATTTCCGCACCAGCGTGCCGGGAATCTATGCCATCGGCGACTGCGTGCCGGGCATGATGCTCGCCCACAAGGCC GAGGACGAGGGTGTGGCGCTGGCCGAGATCCTGGCCGGCAAGCATGGCCATGTGAACTACGGCGTGATCCCGGGCGTGAT CTACACCACGCCCGAGGTGGCAAGCGTCGGGCGCACCGAGGAGTCGCTGAAGGAAGAGGGCCGCGCCTATAAGGTCGGCA AGTTCCCCTTCATGGGCAATGCCCGCGCCAAGGCGGTCTTCCAGGCCGAGGGCTTCGTGAAGATGATCGCGGACAAGGAG ACCGACCGGATCCTCGGCTGCCACATCATCGGCCCGGCGGCGGGCGACCTGATCCACGAGGTCTGCGTGGCGATGGAATT CGGCGCCTCGGCGCAGGATCTGGCCATGACCTGCCACGCCCACCCGACCTGGTCCGAGGCGGTGCGCGAGGCGGCGCTGG CCTGCGGCGACGGCGCGATCCACGCCTGA Protein sequence : MATFDVIIIGAGPGGYVSAIRCAQLGLKTAVVEGREALGGTCLNVGCIPSKALLHATHNLHEVHENFEKMGLMGAHPTVD WSKMQGYKQEVVDGNTKGIEFLFKKNKITWLKGWGSIPEPGKVKVGEEIHEAKSIVIATGSEPASLPGVEADESVIVTST GALSLGRIPETMVVIGAGVIGLELGSVYARLGTKVTVVEYMEAILPGMDAEVVKTTQRILAKQGLSFVLGAAVKGATVSD GKATVTWAAKKDGKETSLTVDTVLVATGRKPFTEGLGLEALGVEMLPRGVVKIDDHFRTSVPGIYAIGDCVPGMMLAHKA EDEGVALAEILAGKHGHVNYGVIPGVIYTTPEVASVGRTEESLKEEGRAYKVGKFPFMGNARAKAVFQAEGFVKMIADKE TDRILGCHIIGPAAGDLIHEVCVAMEFGASAQDLAMTCHAHPTWSEAVREAALACGDGAIHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 6e-71 | 42 |
