Gene Information

Name : RSP_0847 (RSP_0847)
Accession : REF_jgi:RSP_0847
Strain :
Genome accession: NC_007493
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2597469 - 2598155 bp
Length : 687 bp
Strand : +
Note : IMG reference gene:2512955876; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGCTTCCCTGAAGAAGATCCTCTTGGTGGACGATGACGACGACCTTCGCGAGGCGCTGAGCGAACAGCTGGTGATGAC
CGAGGATTTCGACGTGTTCGAGGCCGCCTCGGGGGCCGAAGGCATGGAGAAGGCCAAGGCGGGCCTCTACGACCTCGTGA
TCCTCGATGTGGGTCTGCCGGACACCGACGGGCGCGAGCTCTGCCGGCGGATGCGCAAGGCCGGCGTGAAATGTCCGGTG
CTGATGCTGACCGGGCATGATTCGGACAGCGACACCATTCTGGGCCTCGATGCGGGCGCGAACGACTATGTGACGAAGCC
CTTCAAGTTTCCGGTGTTGCTCGCGCGCATCAGGGCGCAACTTCGTGCGCACGAACAATCAGAGGATGCAGTGTTCCAGC
TCGGCCCCTACAGCTTCCGGCCCGCCCAGAAGATGCTGGTGGACGAAAAGGAGCGCAAGATCCGGCTGACGGAAAAGGAA
ACCAACATCTTGAAATTCCTTTACCGGGCCTCACAAGGTGTTGTGGCTCGCGAGGTGCTTCTCCACGAGGTTTGGGGATA
TAACGCGGGCGTTACAACCCACACGCTAGAGACGCACATCTACAGGTTGCGCCAGAAGATCGAGCCCGACCCGTCGAATG
CGCGTCTTCTCGTCACGGAGTCCGGCGGCTACAGGCTTGTTGCGTGA

Protein sequence :
MASLKKILLVDDDDDLREALSEQLVMTEDFDVFEAASGAEGMEKAKAGLYDLVILDVGLPDTDGRELCRRMRKAGVKCPV
LMLTGHDSDSDTILGLDAGANDYVTKPFKFPVLLARIRAQLRAHEQSEDAVFQLGPYSFRPAQKMLVDEKERKIRLTEKE
TNILKFLYRASQGVVAREVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLVTESGGYRLVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_0847 REF_jgi:RSP_0847 two component transcriptional regulator, winged helix family VFG0596 Protein 5e-23 41