Name : RSP_0701 (RSP_0701) Accession : REF_jgi:RSP_0701 Strain : Genome accession: NC_007493 Putative virulence/resistance : Unknown Product : ABC peptide transporter, fused ATPase domains Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 2444737 - 2446368 bp Length : 1632 bp Strand : - Note : IMG reference gene:2512955722; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region DNA sequence : ATGACCGGCCGCGACGCCAGCGACGCGGGGGCGCCGGTCCTCGACGTGTCGAACCTCACCGTCCGCTTCCGGCAGGACGG GCGGACCGTCGAGGCGGTGAAGGGCGTCTCCTTCACCGTCGGGCGCGGCGAGACCGTGGCGCTGGTGGGCGAGAGCGGAT CGGGCAAGTCGGTGACGGCGCTCTCGACGGTGGCACTCCTGCCCGACAGCGCCGAGGTCGGCGGATCGGTCCGCTACGAG GGCCGCGAGATGGTGGGCGCCCCCGCGGCCGAGCTGCGCCGGGTGCGCGGCAATGACATCAGCTTCATCTTTCAGGAGCC GATGACCTCGCTCAACCCGCTGCACACGATCGAGCGGCAGATCGGCGAGAGCCTCGCTTTGCATCAGGGCCTCGCCGGAG AGGCGGCGCGGGTGCGGATCCTCGAGCTGCTGAGCAAGGTCGGCATCCGCGATCCCGAGACGCGGCTCGGCGCCTATCCG CATCAGCTGTCGGGCGGGCAGCGGCAGCGGGTGATGATCGCCATGGCGCTGGCCAACGGGCCGGATCTGCTGATCGCCGA CGAGCCCACGACCGCGCTCGACGTGACGATCCAGGCGCAGATCCTCGACCTTCTGGCCGAGCTGAAGCGCACCGAGGGGC TGAGCCTTCTGTTCATCACCCACGATCTCGGCGTGGTGCGCCGCATCGCCGACCGGGTCTGCGTCATGCAGGGCGGCGCC ATCGTCGAGCAGGGCCCGGCGCGGCGCATCTTCGAGGCGCCGGAACATCCCTATACCCGGAAGCTCCTCGCGGCGGAGCC CACGGGCAGGCCCGATCCGGTGCCCGAGGGGGCGAAGGAGATCGTGCGGACCGACGGGCTGCGGATCTGGTTTCCGATCC AGCGCGGGATCCTCCGGCGGACGGTCGGCCATGTGAAGGCGGTGAACGGCGTCAGCCTCTCGATCCGCGAGGGCGAGACG CTGGGCGTGGTGGGCGAGAGCGGCTCGGGCAAGACGACGCTCGGGCTCGGCATCCTGCGGCTGATCGAGTCCGAGGGGCC GATCCTCTTTCTCGGGCAGGAGATCCACAGCCGCCGGTCGCGGGCGCTGCGCGAGATCCGGCGCGACATGCAGATCGTGT TTCAGGACCCGTATGGCAGCCTCTCGCCGCGGATGACGGTCGAGCAGATCGTGGCCGAGGGGCTGGGCGTGCATGGCGTC GAGCCGGGACGCGACCGCCGCTCGATGGTGGCCGAGATCCTGACCGAGGTCGGGCTCGATCCGGCGGCGATGGGGCGCTA TCCGCACGAATTCTCGGGCGGCCAGCGCCAGCGCGTGGCCATCGCCCGCGCCATGATCCTGCGGCCGAAGTTCGTCGTGC TGGACGAGCCAACGAGTGCGCTCGATATGACGGTTCAGGTGCAGATCGTGGACCTTTTGCGCGACCTGCAGCGGAAATGG GGTCTGGCCTACCTTTTCATCAGCCACGACCTGCGGGTGGTGCGCGCCCTCTCGCACAAGGTGATCGTGATGAAGGAGGG CAATGTCGTCGAGGCGGGGGAGGGGGCGGAGCTCTTCGCCGCGCCGCAGACCGACTATACCCGCACGCTTCTGGCGGCGG CCTTCGGAGACGCGGTGCCCGAAGCCGTGTGA Protein sequence : MTGRDASDAGAPVLDVSNLTVRFRQDGRTVEAVKGVSFTVGRGETVALVGESGSGKSVTALSTVALLPDSAEVGGSVRYE GREMVGAPAAELRRVRGNDISFIFQEPMTSLNPLHTIERQIGESLALHQGLAGEAARVRILELLSKVGIRDPETRLGAYP HQLSGGQRQRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLAELKRTEGLSLLFITHDLGVVRRIADRVCVMQGGA IVEQGPARRIFEAPEHPYTRKLLAAEPTGRPDPVPEGAKEIVRTDGLRIWFPIQRGILRRTVGHVKAVNGVSLSIREGET LGVVGESGSGKTTLGLGILRLIESEGPILFLGQEIHSRRSRALREIRRDMQIVFQDPYGSLSPRMTVEQIVAEGLGVHGV EPGRDRRSMVAEILTEVGLDPAAMGRYPHEFSGGQRQRVAIARAMILRPKFVVLDEPTSALDMTVQVQIVDLLRDLQRKW GLAYLFISHDLRVVRALSHKVIVMKEGNVVEAGEGAELFAAPQTDYTRTLLAAAFGDAVPEAV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-83 | 43 |
oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-83 | 43 |
cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-83 | 43 |
oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-83 | 43 |
dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-95 | 43 |