Gene Information

Name : RSP_0701 (RSP_0701)
Accession : REF_jgi:RSP_0701
Strain :
Genome accession: NC_007493
Putative virulence/resistance : Unknown
Product : ABC peptide transporter, fused ATPase domains
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2444737 - 2446368 bp
Length : 1632 bp
Strand : -
Note : IMG reference gene:2512955722; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region

DNA sequence :
ATGACCGGCCGCGACGCCAGCGACGCGGGGGCGCCGGTCCTCGACGTGTCGAACCTCACCGTCCGCTTCCGGCAGGACGG
GCGGACCGTCGAGGCGGTGAAGGGCGTCTCCTTCACCGTCGGGCGCGGCGAGACCGTGGCGCTGGTGGGCGAGAGCGGAT
CGGGCAAGTCGGTGACGGCGCTCTCGACGGTGGCACTCCTGCCCGACAGCGCCGAGGTCGGCGGATCGGTCCGCTACGAG
GGCCGCGAGATGGTGGGCGCCCCCGCGGCCGAGCTGCGCCGGGTGCGCGGCAATGACATCAGCTTCATCTTTCAGGAGCC
GATGACCTCGCTCAACCCGCTGCACACGATCGAGCGGCAGATCGGCGAGAGCCTCGCTTTGCATCAGGGCCTCGCCGGAG
AGGCGGCGCGGGTGCGGATCCTCGAGCTGCTGAGCAAGGTCGGCATCCGCGATCCCGAGACGCGGCTCGGCGCCTATCCG
CATCAGCTGTCGGGCGGGCAGCGGCAGCGGGTGATGATCGCCATGGCGCTGGCCAACGGGCCGGATCTGCTGATCGCCGA
CGAGCCCACGACCGCGCTCGACGTGACGATCCAGGCGCAGATCCTCGACCTTCTGGCCGAGCTGAAGCGCACCGAGGGGC
TGAGCCTTCTGTTCATCACCCACGATCTCGGCGTGGTGCGCCGCATCGCCGACCGGGTCTGCGTCATGCAGGGCGGCGCC
ATCGTCGAGCAGGGCCCGGCGCGGCGCATCTTCGAGGCGCCGGAACATCCCTATACCCGGAAGCTCCTCGCGGCGGAGCC
CACGGGCAGGCCCGATCCGGTGCCCGAGGGGGCGAAGGAGATCGTGCGGACCGACGGGCTGCGGATCTGGTTTCCGATCC
AGCGCGGGATCCTCCGGCGGACGGTCGGCCATGTGAAGGCGGTGAACGGCGTCAGCCTCTCGATCCGCGAGGGCGAGACG
CTGGGCGTGGTGGGCGAGAGCGGCTCGGGCAAGACGACGCTCGGGCTCGGCATCCTGCGGCTGATCGAGTCCGAGGGGCC
GATCCTCTTTCTCGGGCAGGAGATCCACAGCCGCCGGTCGCGGGCGCTGCGCGAGATCCGGCGCGACATGCAGATCGTGT
TTCAGGACCCGTATGGCAGCCTCTCGCCGCGGATGACGGTCGAGCAGATCGTGGCCGAGGGGCTGGGCGTGCATGGCGTC
GAGCCGGGACGCGACCGCCGCTCGATGGTGGCCGAGATCCTGACCGAGGTCGGGCTCGATCCGGCGGCGATGGGGCGCTA
TCCGCACGAATTCTCGGGCGGCCAGCGCCAGCGCGTGGCCATCGCCCGCGCCATGATCCTGCGGCCGAAGTTCGTCGTGC
TGGACGAGCCAACGAGTGCGCTCGATATGACGGTTCAGGTGCAGATCGTGGACCTTTTGCGCGACCTGCAGCGGAAATGG
GGTCTGGCCTACCTTTTCATCAGCCACGACCTGCGGGTGGTGCGCGCCCTCTCGCACAAGGTGATCGTGATGAAGGAGGG
CAATGTCGTCGAGGCGGGGGAGGGGGCGGAGCTCTTCGCCGCGCCGCAGACCGACTATACCCGCACGCTTCTGGCGGCGG
CCTTCGGAGACGCGGTGCCCGAAGCCGTGTGA

Protein sequence :
MTGRDASDAGAPVLDVSNLTVRFRQDGRTVEAVKGVSFTVGRGETVALVGESGSGKSVTALSTVALLPDSAEVGGSVRYE
GREMVGAPAAELRRVRGNDISFIFQEPMTSLNPLHTIERQIGESLALHQGLAGEAARVRILELLSKVGIRDPETRLGAYP
HQLSGGQRQRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLAELKRTEGLSLLFITHDLGVVRRIADRVCVMQGGA
IVEQGPARRIFEAPEHPYTRKLLAAEPTGRPDPVPEGAKEIVRTDGLRIWFPIQRGILRRTVGHVKAVNGVSLSIREGET
LGVVGESGSGKTTLGLGILRLIESEGPILFLGQEIHSRRSRALREIRRDMQIVFQDPYGSLSPRMTVEQIVAEGLGVHGV
EPGRDRRSMVAEILTEVGLDPAAMGRYPHEFSGGQRQRVAIARAMILRPKFVVLDEPTSALDMTVQVQIVDLLRDLQRKW
GLAYLFISHDLRVVRALSHKVIVMKEGNVVEAGEGAELFAAPQTDYTRTLLAAAFGDAVPEAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-83 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-83 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-83 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-83 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-95 43