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Name : RSP_0484 (RSP_0484) Accession : REF_jgi:RSP_0484 Strain : Genome accession: NC_007493 Putative virulence/resistance : Virulence Product : TRAP-T family transporter, DctM (12 TMs) subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2218593 - 2219873 bp Length : 1281 bp Strand : - Note : IMG reference gene:2512955496; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit DNA sequence : TTGGAGCTCTTCATCCTGTTCGGAAGCTTCGTCTTCCTTCTCCTGATCGGCACGCCTGTCGCCTTCTGCCTCGGCGTGTC GAGTTTCCTCACCGTGCTCTATCTGGGCCTGCCGCCGGTCGTGGTGTTCCAGCGCCTCAACTCGGGCGTCTCGGTCTATG CGCTGATGGCCATCCCCTTCTTCATCTATTCGGGCGATCTGATGGTGCGGGGCGACATCGCCCGACGGCTCGTGGCGCTG GCAGGCGCGCTGGTCGGCCACCTCCGGGGCGGGCTCGGACAGGTGAACGTCGTGGCCTCGGTCATGTTCGGCGGCGTCTC GGGCTCGGCCGCGGCGGATGCCTCGGCGGTGGGCGGCCTCATGGTGCCGCAGATGAAGGCCCGCGGCTACGGCGTCGACT ATGCCGTGAACCTGACCGTCGTGGGCTCGATCATCGCGCTGATGATCCCGCCCTCGCACAACATGATCATCTATTCCATC GCCGCGGGCGGCCGGATCTCGATCGCGGACCTCTTCACGGCAGGCATCATCCCGGGCCTCCTGCTCGCGCTGGGGCTGAT GGTGGCGGCCTATTTCGTGGCCCGCCGCCGCGGCTATCCGACCGAGCGCTTTCCGGGGCTGCGCGCGCTCGGTGCCATCT TCGTGAGCGCCGTGCCGGGGCTCATCCTCGTCGCGCTGATCTTCGGCGGCGTGCGCTCGGGCATCTTCACCGCCTCGGAA AGCGCCAACATCGCCGTGGTCTATGCGCTGCTCGTCACCATCCTGATCTACCGCACTCTCACGTGGTCCGAGTTCGTCCA TGCCACCATCGGCGCGGTGCGCACGACGGCCATGGTGCTGCTCGTGATCGGCTGCGCGGCCTCGTTCGGCTGGCTTCTGG CCTATCTCAAGGTGCCGACGGCGCTGGTGGCCTTCATGCAGGGGCTGTCGGACAATCCGCTGGTGATCCTGCTGCTCATC AACGTGGCGCTCCTGGTGCTCGGCACCTTCATGGACATGTCGCCGCTGATCGTCATCACGACGCCGATCTTCCTGCCGGT GGCGCAGGCCTTCGGGGTGGATCCGGTGCATTTCGGCGTCATCCTGATCCTGAACCTCGGGATCGGCCTCTGCACGCCGC CCGTCGGGGCCGTGCTCTTCGTGGGCTGCGCCGTGGGGCGGATCTCGATCTGGACGGCGATGCGCACCATCTGGCCCTTC TACGGGGCGGCCCTCGCCGTCCTGCTGCTCGTGACCTACATCCCGGCGCTGTCGCTCTGGCTGCCGGCCCAATTCCGCTG A Protein sequence : MELFILFGSFVFLLLIGTPVAFCLGVSSFLTVLYLGLPPVVVFQRLNSGVSVYALMAIPFFIYSGDLMVRGDIARRLVAL AGALVGHLRGGLGQVNVVASVMFGGVSGSAAADASAVGGLMVPQMKARGYGVDYAVNLTVVGSIIALMIPPSHNMIIYSI AAGGRISIADLFTAGIIPGLLLALGLMVAAYFVARRRGYPTERFPGLRALGAIFVSAVPGLILVALIFGGVRSGIFTASE SANIAVVYALLVTILIYRTLTWSEFVHATIGAVRTTAMVLLVIGCAASFGWLLAYLKVPTALVAFMQGLSDNPLVILLLI NVALLVLGTFMDMSPLIVITTPIFLPVAQAFGVDPVHFGVILILNLGIGLCTPPVGAVLFVGCAVGRISIWTAMRTIWPF YGAALAVLLLVTYIPALSLWLPAQFR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-34 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 1e-34 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 1e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RSP_0484 | REF_jgi:RSP_0484 | TRAP-T family transporter, DctM (12 TMs) subunit | VFG1110 | Protein | 6e-35 | 41 |
