|
Name : glnA1 (RSP_0147) Accession : REF_jgi:RSP_0147 Strain : Genome accession: NC_007493 Putative virulence/resistance : Virulence Product : Glutamine synthetase class-I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 1859996 - 1861405 bp Length : 1410 bp Strand : + Note : IMG reference gene:2512955143; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I DNA sequence : ATGAGCAAAGTAGCTGATGCTCTCAAACTGATGAAAGACGAGGAGGTCGAATATGTCGACATCCGCTTCACCGACCCGCG CGGCAAGCTCCAGCATGTGACGCTGGTGGCCGATCTCGTCGACGAGGACTTCTTCGAGGAAGGCTTCATGTTCGACGGCT CGTCCATCGCCGGCTGGAAGTCGATCGACCAGTCCGACATGAAGCTGATCCCGGATGCGGGCTCGGTCTACATCGACCCG TTCTATGCCGAGAAGACGCTCTGCGTGCATTGCAACGTCGTCGAGCCCGACACGGGCGAGGCCTACAGCCGCGACCCGCG CGGCACGGCCGTCAAGGCCGAAGCCTACCTGAAGGCTTCGGGCATCGGTGACGTGGCCTATTTCGGGCCGGAAGCCGAAT TCTTCATCTTCGACGACGTGCGCTACTCGGTGACGCCGGCGAAGGTGGCCTACCAGATCGACGCCGATGCGGCGGCCTGG AACACCGACTCGGAATATGAGATGGGCAACCTCGCCCACCGCGCCGGCCACAAGGGCGGCTACTTCCCGGTGAACCCGAT CGACGAGGCCCAGGACCTGCGCGGCGAGATGCTCTCGACCATGAAGCGCATGGGCATGAAGGTGGACAAGCACCACCACG AAGTGGCGACCTGCCAGCACGAACTCGGGCTGATCTTCGGCGGGCTGACCGAGCAGGCCGACAACATCCTGAAATACAAG TATGTCATCCACAACGTCGCGGCCGCCTACGGCAAGACCGTGACCTTCATGCCGAAGCCCATGAAGGGCGACAACGGCTC GGGGATGCACGTCAACATGTCGATCTGGAAGGACGGCAAGCCGCTCTTCGCTGGCGACAAATATGCCGACCTGAGCCAGG AAGCCCTGTGGTTCATCGGCGGCATCCTGAAGCACGCCAAGGCGCTGAACGCGCTGACGAACCCGGCCACCAACAGCTAC AAGCGGCTGATCCCGGGCTTCGAGGCTCCGGTGCTGCGCGCCTACTCGGCCCGCAACCGCTCGGGCTGCGTCCGTATTCC GTGGACCGAGTCGCCGAAGGCCAAGCGCGTCGAAGCCCGTTTCCCCGATCCGTCGGCGAACCCGTATCTCGCCTTTGCGG CGCTGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCGATCCGGGCCCGGCATCGGACAAGGACCTCTACGACCTG CCGCCGGAAGAACTGGCCGCCATCCCGACCGTCTGCGGCTCGCTCCGCGAGGCGCTGGAAGAGCTGGAGAAGGACCACGA CTTCCTGCTCGCCGGCGACGTGTTCACCAAGGACCAACTCGAGGGCTACATGGCGCTCAAGTGGGAAGAGGTCTATGCCT ACGAGCACACGCCGCACCCGGTGGAATATCAGATGTACTACAGCTGCTGA Protein sequence : MSKVADALKLMKDEEVEYVDIRFTDPRGKLQHVTLVADLVDEDFFEEGFMFDGSSIAGWKSIDQSDMKLIPDAGSVYIDP FYAEKTLCVHCNVVEPDTGEAYSRDPRGTAVKAEAYLKASGIGDVAYFGPEAEFFIFDDVRYSVTPAKVAYQIDADAAAW NTDSEYEMGNLAHRAGHKGGYFPVNPIDEAQDLRGEMLSTMKRMGMKVDKHHHEVATCQHELGLIFGGLTEQADNILKYK YVIHNVAAAYGKTVTFMPKPMKGDNGSGMHVNMSIWKDGKPLFAGDKYADLSQEALWFIGGILKHAKALNALTNPATNSY KRLIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARFPDPSANPYLAFAALLMAGLDGIKNKIDPGPASDKDLYDL PPEELAAIPTVCGSLREALEELEKDHDFLLAGDVFTKDQLEGYMALKWEEVYAYEHTPHPVEYQMYYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 4e-100 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA1 | REF_jgi:RSP_0147 | Glutamine synthetase class-I | VFG1399 | Protein | 1e-99 | 53 |
