Gene Information

Name : fliI (RSP_0056)
Accession : REF_jgi:RSP_0056
Strain :
Genome accession: NC_007493
Putative virulence/resistance : Virulence
Product : FliI, Flagellum-specific ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1763103 - 1764431 bp
Length : 1329 bp
Strand : +
Note : IMG reference gene:2512955045; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family

DNA sequence : 
ATGAACGCGCTGATCGAGGGGCTCGGCCACCATCTCGCCCAGCTGCCGCACCGGCAGGCCCCGCAGGTCACGGGCCGCGT
GGTGCGCTACGACGGGCTTCTGCTGGAATGCGCAGGTTTCCCCGTGAGCCCCGGGGCGCTCTGCCGTGTGGCCACCGAGG
ATGGCCGCGAGGTGCAGGGCGAAGTGATCGGCTTCGCGCAGGGCCGCAACCTGCTCTTCCTCGACCAGATGCGGGCGCCG
GTGATCGCGGGCGCGCGGGTGCGCCTCGTGCCCGGCGGGCAGATGGCCGCGGTGGGGCCCGCGCTCCTCGGCCGGGTGAT
CGATGCCGAGGGCGCGCCGCTCGACGGCCTGCCAGCCCCCGACTGCATGGGCGAATGGCCGCTCGCGGGTCGGGTGATGA
ACCCGCTCGCCCGCACCGCCGTGAGCCGCCCGCTCGACGTGGGGGTGCGCGCGATCAACGCGGCGCTGACGGTGGGACAG
GGCCAGCGCATCGGCATCGTCGCGGGCTCGGGCGTGGGCAAGTCGGTGCTCATCGAGATGATGACGCGCTACACCGCGGC
CGACGTGATCGTCGTGGGGCTGATCGGCGAGCGCGCGCGCGAGGTGGGCGCCTTTGCGGCCTCGGTCATGCAGGGCGAGG
CCGCGCGGAAGCTCTGCATGGTGGCGGTGCCCGCCGACCGTTCGCCGCTCCTGCGGCTGCGGGCCGCGCGAAGGGCCACC
GCCATCGCCGAACATTTCCGCAGCGAGGGCAAGCAGGTTCTCCTCATCATGGACAGCCTCACCCGCGTGGCCCATGCGCA
GCGCGAGGTGGGGCTCGCCCTCGGCGAGCAGCCGACGGCCAAGGGCTATCCGCCCTCGGTCGTCTCGATGATCCCGGGCC
TGATCGAGCGCACGGGCCCGGGCCTTCCGGGCGAGGGCGCCATCACCGCGATCTATACCGTGCTGGCCGACGGCGACGAC
ACGACGAACGATCCGGTGGTCGATACGGCGCGCGCCATCCTCGATGGCCATTTCGTGCTGTCGCGGCGGCAGACCCAGAT
GGGGCTCTATCCGGCGATCGACATTCCTCATTCGGTCAGCCGGACCATGAACGACGTGGTGGACGACCGCCACCGGCGCG
CCGCGGCCCGTCTGCGCCAGCTCATCGCGCTCTATTCCGACAACCGGGATCTGATGCTGATGGGAGGCTATGCGGCCGGG
CAGGATGCCGATCTCGATCAGGCGGTGCAGCTGTGGCCGAGGATCCGGGCGCTGATCGGTCAGGGGCCGCACGAGCCCGC
GGATTTCGAGGCGAGCCGCGCGGCCCTTCTCGAGCTGACGGGGCTCTGA

Protein sequence : 
MNALIEGLGHHLAQLPHRQAPQVTGRVVRYDGLLLECAGFPVSPGALCRVATEDGREVQGEVIGFAQGRNLLFLDQMRAP
VIAGARVRLVPGGQMAAVGPALLGRVIDAEGAPLDGLPAPDCMGEWPLAGRVMNPLARTAVSRPLDVGVRAINAALTVGQ
GQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIGERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRAT
AIAEHFRSEGKQVLLIMDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLADGDD
TTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAARLRQLIALYSDNRDLMLMGGYAAG
QDADLDQAVQLWPRIRALIGQGPHEPADFEASRAALLELTGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AAK26715.1 EscN Virulence LEE Protein 7e-56 46
escN AAL57542.1 EscN Virulence LEE Protein 7e-56 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-56 46
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-56 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-56 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-56 46
escN AAC38383.1 EscN Virulence LEE Protein 2e-56 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-56 46
escN AAC31513.1 L0034 Virulence LEE Protein 2e-56 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-56 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-56 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-56 45
unnamed AAL06369.1 EscN Virulence LEE Protein 2e-54 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-56 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-62 43
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 7e-61 43
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-60 43
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 7e-61 43
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-60 43
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-60 43
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-51 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-51 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-51 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-51 43
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-51 43
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 4e-61 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-60 42
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-57 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-57 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-57 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-59 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-57 42
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-57 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-57 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-54 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-54 41
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-56 41
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-56 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG2331 Protein 1e-83 52
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG1254 Protein 9e-82 50
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG2499 Protein 9e-83 49
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG0812 Protein 9e-57 46
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG0730 Protein 1e-56 46
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG0192 Protein 4e-67 45
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG0390 Protein 7e-66 44
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG0048 Protein 2e-61 43
fliI REF_jgi:RSP_0056 FliI, Flagellum-specific ATPase VFG0515 Protein 8e-52 43