Gene Information

Name : RSP_1542 (RSP_1542)
Accession : REF_jgi:RSP_1542
Strain :
Genome accession: NC_007493
Putative virulence/resistance : Virulence
Product : ABC transporter, ATPase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 133184 - 133873 bp
Length : 690 bp
Strand : -
Note : IMG reference gene:2512953436; PFAM: ABC transporter

DNA sequence : 
GTGTGGACGGTGCGGGTGAAGGATCCTTCGGACAAGCTGCTCTCGCTCGAGGGCGTGACCAAAAGCTACGCGACCGGCGA
GGGGCCGGTGCAGGTTCTGGCCGGGGTGGACCTGACGCTCGCCGCGGGCGAGAGCCTCGCGCTGACGGGAGAGTCGGGCA
GCGGCAAGAGCACGCTCCTGCATCTGGCGGCCGGGCTCGATGCGGCGGACGCGGGCCGGATCGTCGTGGCGGGCCATGAT
ATCTCGCAGGCCGGCGATGCCGAGCGCGCGCGTCTGCGGCGGGGCACGGTCGGGCTCGTCTTCCAGCAGTTCAACCTGAT
CCCCTCGCTCGACGTGGCGGCCAATCTTGCCTTTCAGTCCCGCCTCGCCGGTCGGCACGATCCCCAATGGCAGGCCGAGC
TGGCCGAGACGCTGGGGCTTGCCGCCTGCCTGCACCGCTATCCCGAGCAGCTCTCGGGCGGCCAGCAGCAGCGGGTGGCC
ATCGGCCGGACGCTTGCCGCCCGCCCCCGCCTCGTGCTGGCCGACGAGCCCACCGGCAACCTCGACGAGGCCACGGGCGA
TGCCGTCATGGCGCTTTTCCTGCGCCTCGTGAGCCAGACGGGCGCCGGGCTTCTGATGGTCACCCATTCGGCCCGCCTCG
CGGGGCGGCTTCAGGGCCGGGTGCAGCTCTCGGCGGGGCGGGTCGCATGA

Protein sequence : 
MWTVRVKDPSDKLLSLEGVTKSYATGEGPVQVLAGVDLTLAAGESLALTGESGSGKSTLLHLAAGLDAADAGRIVVAGHD
ISQAGDAERARLRRGTVGLVFQQFNLIPSLDVAANLAFQSRLAGRHDPQWQAELAETLGLAACLHRYPEQLSGGQQQRVA
IGRTLAARPRLVLADEPTGNLDEATGDAVMALFLRLVSQTGAGLLMVTHSARLAGRLQGRVQLSAGRVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_1542 REF_jgi:RSP_1542 ABC transporter, ATPase subunit CP001581.1.gene798.p Protein 2e-34 42
RSP_1542 REF_jgi:RSP_1542 ABC transporter, ATPase subunit NC_008702.1.4606598. Protein 5e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSP_1542 REF_jgi:RSP_1542 ABC transporter, ATPase subunit VFG2059 Protein 3e-15 41