Gene Information

Name : Pfl01_5606 (Pfl01_5606)
Accession : YP_351334.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6277952 - 6278641 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGGTTGGCAGGAGCATTCTGATCGTCGACGACGAAGCGCCCATTCGCGAAATGATCGCCGTTGCGTTGGAAATGGCCGG
CTATGACTGCCTCGAGGCAGAGAACTCGCAGCAGGCCCACGCCATCATCGTCGACCGCAAGCCGGACCTGATCCTGCTCG
ACTGGATGCTGCCCGGCACCTCCGGCATCGAGCTGGCCCGCCGCCTCAAGCGTGACGAACTGACCGGGGACATCCCGATC
ATCATGCTCACCGCCAAGGGCGAAGAGGACAACAAGATCCAGGGCCTGGAAGTCGGCGCCGACGACTACATCACCAAACC
GTTTTCCCCCCGCGAACTGGTGGCACGCCTCAAGGCCGTGCTGCGTCGCGCCGGCCCGACCGATGGCGAAGCGCCGATCG
AAGTCGGCGGCCTGCTGCTCGACCCGATCAGCCACCGCGTGACCATCGACGGCCGTCCGGCCGAGATGGGCCCGACCGAA
TACCGTCTGCTGCAATTCTTCATGACCCACCAGGAGCGCGCCTACACCCGTGGCCAGTTGCTGGACCAGGTCTGGGGCGG
CAACGTCTATGTTGAAGAGCGCACCGTCGACGTGCACATCCGGCGCCTGCGCAAGGCCCTCGGCGACGCCTACGAAAATC
TGGTACAAACCGTGCGCGGCACCGGCTACCGGTTCTCCACCAAGGCCTGA

Protein sequence :
MVGRSILIVDDEAPIREMIAVALEMAGYDCLEAENSQQAHAIIVDRKPDLILLDWMLPGTSGIELARRLKRDELTGDIPI
IMLTAKGEEDNKIQGLEVGADDYITKPFSPRELVARLKAVLRRAGPTDGEAPIEVGGLLLDPISHRVTIDGRPAEMGPTE
YRLLQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHIRRLRKALGDAYENLVQTVRGTGYRFSTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mprA YP_005680459.1 response regulator mprA Not tested PiCp 3 Protein 2e-35 41
mprA YP_005682550.1 response regulator mprA Not tested PiCp 3 Protein 2e-35 41
tcsR1 YP_003782583.1 two-component system transcriptional regulatory protein Not tested PiCp 3 Protein 2e-35 41
mprA YP_005684640.1 response regulator mprA Not tested PiCp 3 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_5606 YP_351334.1 two component transcriptional regulator HE999704.1.gene2815. Protein 6e-41 44
Pfl01_5606 YP_351334.1 two component transcriptional regulator AE000516.2.gene3505. Protein 2e-31 42
Pfl01_5606 YP_351334.1 two component transcriptional regulator AE016830.1.gene1681. Protein 3e-39 41
Pfl01_5606 YP_351334.1 two component transcriptional regulator NC_012469.1.7685629. Protein 1e-34 41