Gene Information

Name : Pfl01_5594 (Pfl01_5594)
Accession : YP_351322.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 6264965 - 6266440 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
ATGAGCACTAGCGCAGCACAACAGAACGCCGCAGAAAACGGCGAGTACAGCATCCTCGACAGCATCATCGCCGAAACCCG
CCTGACGCCGGACGACGAAGCCTACGACATCGCCAAACGCGGTGTGTCGGCGTTCATCGAAGAGCTGCTCAAGCCGCAGA
ACAACGGTGAGCCGGTCAAGAAAGCCATGGTTGACCGCATGATCGCCGAGATCGATGCCAAGCTCAGCCGTCAGATGGAC
GAAATCCTGCACCACCCGGACTTCCAGGCCCTGGAATCGTCGTGGCGTGGCCTGCAACTGCTGGTCGACCGCACCAACTT
CCGCGAAAACATCAAGATCGAAATCCTCAACGTCTCCAAAGAAGACCTGCTGGACGATTTCGAAGACTCGCCGGAAGTGA
TGCAGTCGGGCCTGTACAAGCACATCTACACCGCTGAATACGGCCAGTTCGGTGGTCAGCCGGTTGGCGCGATCATTGCC
AACTACTACATGTCCCCAAGCTCGCCGGACGTGAAGCTGATGCAGTACGTGTCCAGCGTAGCCTGCATGTCCCACGCACC
GTTCATCGCCGCCGCCGGCCCGAAATTCTTCGGCCTGGAAAGCTTCACCGGCCTGCCGGACCTGAAGGATCTGAAAGATC
ACTTCGAAGGCCCGCAATTCGCCAAATGGCAGAGCTTCCGTACCTCGGAAGACTCCCGCTACGTCGGCCTGACCGTGCCG
CGTTTCCTGCTGCGTAACCCGTACGACCCGGAAGAAAACCCGGTCAAATCGTTCGTGTACAAGGAAAACGTTGCCAACAG
CCACGAGCACTACCTGTGGGGCAACACCGCTTACGCGTTCGGCACCAAGCTGACCGACAGCTTCGCCAAGTTCCGCTGGT
GCCCGAACATCATCGGCCCACAGAGCGGCGGCGCGGTTGAAGACCTGCCTCTGCACCACTTCGAAAGCATGGGCGAAATC
GAAACCAAGATTCCTACCGAAGTTCTGGTTTCCGACCGTCGTGAATACGAACTGGCCGAGGAAGGCTTCATCTCCCTGAC
CATGCGCAAAGGCTCCGACAACGCGGCGTTCTTCTCCGCCAGCTCGGTGCAGAAGCCGAAGTTCTTCGGCATCAGCGCAG
AAGGCAAGGCGGCAGAGCTGAACTACAAGCTCGGCACCCAACTGCCGTACATGATGATCGTCAACCGCCTGGCTCACTAC
CTGAAAGTGCTGCAGCGCGAGCAACTCGGTTCGTGGAAAGAGCGTACCGACCTCGAGCTGGAACTGAACAAGTGGATCCG
CCAGTACGTGGCCGACCAGGAAAACCCGAGCGCCGAAGTACGTGGCCGCCGTCCGCTGCGCGCTGCGCAAGTGATCGTCA
GCGACGTTGAAGGCGAGCCGGGCTGGTACCGCGTCAGCCTGAACGTGCGCCCGCACTTCAAGTACATGGGTGCCGATTTC
ACCCTGTCGCTGGTTGGCAAGCTGGACAAAGAGTAA

Protein sequence :
MSTSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVKKAMVDRMIAEIDAKLSRQMD
EILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSKEDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIA
NYYMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGPQSGGAVEDLPLHHFESMGEI
ETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHY
LKVLQREQLGSWKERTDLELELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-165 64
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 8e-166 64
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 2e-158 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_5594 YP_351322.1 hypothetical protein VFG2093 Protein 0.0 69
Pfl01_5594 YP_351322.1 hypothetical protein VFG2475 Protein 3e-173 65