|
Name : Pfl01_5559 (Pfl01_5559) Accession : YP_351287.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 6226121 - 6228196 bp Length : 2076 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGACGGAGCTGTCGCAGGTGTCGGTCACCGCACTCAAGGGTGTCGGTGAAGCCATGGCCGAGAAACTGGCCAAGGTCGG TCTGGAAAACCTCCAGGACGTGCTGTTCCACCTGCCGCTGCGTTATCAGGATCGCACCCGCGTGGTGCCGATCGGCGCGT TGCGGCCGGGACAGGACGCCGTGGTCGAAGGCACCGTCAGCGGTGCCGACGTGGTCATGGGCCGGCGCCGCAGCCTCGTC GTGCGCTTGCAGGACGGCACCGGCGGCTTGAGCCTGCGCTTCTACCATTTCAGCAACGCGCAGAAAGAAGGCCTCAAGCG CGGCACGCGGATTCGCTGCTACGGCGAAGCCCGGCCCGGAGCCTCGGGGCTGGAGATCTACCACCCGGAATACCGCGCCA TCAATGGCGACGAACCGCCGCCGGTGGATGAAACCCTGACCCCGGTCTACCCACTGACCGAAGGCCTGACCCAGGCGCGC CTGCGCCAGTTGTGCATGCAGACGCTGACCCTGCTCAAGCCGGCCACCCTGCCCGACTGGTTGCCGACCGAGCTGGCCCG CGACTACCAACTGGCGCCGCTGGCCGACGCGATCCGCTACCTGCACAACCCGCCCGCCGATGCCGACGTCGACGAACTCG CCCTCGGCCATCACTGGGCCCAGCATCGCCTCGCTTTCGAAGAACTACTGACTCACCAGCTATCTCAGCAACGCCTGCGC GAAAGCATGCGTTCCCTGCGTGCACCGGCGATGCCGAAAGCCACCAAGCTGCCGGCGAAATACCTGGCCAACCTCGGCTT CAACCCGACCGGCGCGCAACAGCGGGTCGGCAACGAAATCGCCTACGACCTCAGTCAGCACGAGCCGATGCTGCGGCTGA TTCAGGGCGACGTCGGCGCGGGCAAAACCGTGGTCGCCGCCCTCGCTGCGCTGCAAGCGCTTGAGGCGGGTTATCAGGTC GCACTGATGGCGCCGACCGAGATCCTCGCCGAGCAGCACTTCATCACCTTCAAACGCTGGCTCGAACCGCTGGGCATCGA CGTGGCGTGGCTGGCCGGCAAGCTCAAGGGCAAGAACCGCGTCGCCGCGCTGGAACAGATCGCCAGCGGCACGCCGATGG TGGTCGGCACCCACGCGCTGTTCCAGGACGAAGTGCAGTTCAAGAACCTCGCGCTGGTGATCATCGACGAACAACACCGC TTCGGCGTGCAGCAACGTCTGGCGCTGCGGCAGAAAGGCGTCGGCGGGCGCATGTGTCCGCATCAACTGATCATGACCGC CACACCGATTCCGCGGACGCTGGCGATGAGCGCCTACGCCGACCTCGACACCTCGATCCTCGACGAACTGCCGCCCGGCC GAACTCCGGTCAACACCGTGCTGGTCACCGACACCCGCCGCGTCGAAGTCATCGAACGGGTGCGCAGCGCCTGCGCCGAA GGCCGTCAGGCCTACTGGGTGTGCACGCTGATCGAAGAGTCCGAAGAGCTGACCTGCCAGGCCGCCGAAACCACTTTCGA AGACCTGACCGCCGCCCTCGGCGAGTTGAAGGTCGGGCTGATCCACGGCCGCATGAAACCTGCCGAAAAAGCCGCCGTCA TGGCCGAATTCAAGGCCGGCAACCTGCAACTGCTGGTCGCCACCACCGTGATCGAAGTCGGCGTCGACGTACCCAACGCC AGCCTGATGATCATCGAGAACCCTGAGCGTCTCGGCCTTGCGCAACTGCACCAGTTGCGCGGTCGTGTCGGCCGGGGCAG CGCGGTCAGCCATTGCGTGCTGCTCTACCATCCGCCGCTGTCGCAGATCGGTCGCCAGCGCCTGGGCATCATGCGCGAGA CCAACGACGGTTTCGTCATCGCCGAAAAAGACCTCGAACTGCGCGGCCCCGGCGAAATGCTCGGCACCCGCCAGACCGGC CTGCTGCAATTCAAGGTCGCGGACCTTATGCGCGACGCCGATTTGTTGCCTGCCGTGCGCGATGCCGCCCAGGCCTTGCT CGAACGCTGGCCTACCCACGTCAGCCCGTTGCTCGACCGCTGGCTGCGACACGGGCAGCAATACGGCCAAGTGTGA Protein sequence : MTELSQVSVTALKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGALRPGQDAVVEGTVSGADVVMGRRRSLV VRLQDGTGGLSLRFYHFSNAQKEGLKRGTRIRCYGEARPGASGLEIYHPEYRAINGDEPPPVDETLTPVYPLTEGLTQAR LRQLCMQTLTLLKPATLPDWLPTELARDYQLAPLADAIRYLHNPPADADVDELALGHHWAQHRLAFEELLTHQLSQQRLR ESMRSLRAPAMPKATKLPAKYLANLGFNPTGAQQRVGNEIAYDLSQHEPMLRLIQGDVGAGKTVVAALAALQALEAGYQV ALMAPTEILAEQHFITFKRWLEPLGIDVAWLAGKLKGKNRVAALEQIASGTPMVVGTHALFQDEVQFKNLALVIIDEQHR FGVQQRLALRQKGVGGRMCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVTDTRRVEVIERVRSACAE GRQAYWVCTLIEESEELTCQAAETTFEDLTAALGELKVGLIHGRMKPAEKAAVMAEFKAGNLQLLVATTVIEVGVDVPNA SLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLSQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTG LLQFKVADLMRDADLLPAVRDAAQALLERWPTHVSPLLDRWLRHGQQYGQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-114 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pfl01_5559 | YP_351287.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 85 |
