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Name : rph (Pfl01_5547) Accession : YP_351275.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 6215466 - 6216188 bp Length : 723 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAAACGTCCAAGTGGTCGCGCTGCCGATCAGCTCCGCTCGATCCGCATTACCCGCAACTACACCAAACACGCCGAGGG ATCGGTACTGGTCGAATTCGGTGATACCAAAGTCATCTGCACCGTCAGCGTCGAGAACGGCGTGCCGCGTTTCCTCAAAG GCCAGGGCCAGGGTTGGCTGACCGCCGAATACGGCATGTTGCCGCGCGCCACCGGCGAGCGTAACCAGCGTGAAGCGAGC CGCGGCAAGCAGGGCGGCCGTACCCTGGAAATCCAGCGCCTGATCGGTCGTTCCCTGCGCGCCGCGCTGGACATGTCCAA GCTGGGCGACCTCACCCTTTACGTCGACTGCGACGTGATCCAGGCTGACGGCGGTACCCGCACCGCGTCGATCACCGGCG CCATGGTTGCGCTGGTCGATGCACTGAAAGTGATCAAGAAGCGCGGCGGCCTGAAAGGCGGCGACCCGCTCAAGCAAATG ATCGGCGCCGTTTCCGTGGGCATGTACCAGGGCGAGCCGGTGCTGGATCTGGACTATCTTGAAGATTCCGCTGCCGAGAC CGACCTCAATGTGGTGATGACCAGCACCGGTGGTTTCATCGAAGTGCAGGGCACTGCCGAAGGCGCGCCGTTCCAGCCTG AAGAGTTGAACGCGATGCTGGAGCTGGCGAAGAAAGGCATGAACGAGATCTTCGAACTGCAAAAGGCTGCACTGGCCGAC TGA Protein sequence : MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRATGERNQREAS RGKQGGRTLEIQRLIGRSLRAALDMSKLGDLTLYVDCDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQM IGAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPEELNAMLELAKKGMNEIFELQKAALAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 4e-64 | 59 |
