Gene Information

Name : Pfl01_5488 (Pfl01_5488)
Accession : YP_351216.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : two-component response regulator AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 6155728 - 6156474 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGAATGTCCTGATCGTTGATGACGAACCACTGGCCCGCGAGCGACTCAGCCGAATGGTGAGCGAGCTCGAGGGGTACAC
AGTCCTGGAGCCCAGCGCCACCAATGGCGAAGAGGCGTTGGCACTGATCGACAGCCACAAGCCGGATATCGTACTGCTCG
ATATCCGCATGCCGGGCCTCGATGGCCTGCAGGTGGCTGCCCGTCTGTGCGAACGCGAAACCCCGCCGGCCGTGGTGTTT
TGCGCAGGTCCCGATGAATTTGCCGTGGAAGCCCTGCAGGCCAGCGCCGTGGGCTATGTGGTGAAACCCGTGCGAACCGA
ACATCTGCATGACGCCCTGAAACGGGCTGAACGTCCCAACCGGGCCCAGCTCTCGGCCCTGACCCGTCCTGCCGCCGAAA
GCGGTAACGGCCCGCGCAGCCACATCAGCGCCCGCACCCGCAAAGGCATCGAACTGATTCCGCTGGATCAGGTGGTGTAC
TTCATTGCCGACCACAAATACGTGACATTGCGCCACGAAGCTGGCGAAGTCCTTCTGGATGAGCCGCTCAAGGCGCTGGA
AGACGAATTCGGCGAGCGCTTCGTGCGGATCCACCGCAACGCGCTGGTCGCCCGCGACCGCATCGAGCGTCTGCAACGTA
CACCGCTGGGCCACTTCCAGTTGTTCCTCAAGGGCCTCAACGGTGACGCGCTGATCGTCAGCCGCCGGCATGTGGCGGGC
GTGCGCAAAATGATGCAGGGGCTTTAG

Protein sequence :
MNVLIVDDEPLARERLSRMVSELEGYTVLEPSATNGEEALALIDSHKPDIVLLDIRMPGLDGLQVAARLCERETPPAVVF
CAGPDEFAVEALQASAVGYVVKPVRTEHLHDALKRAERPNRAQLSALTRPAAESGNGPRSHISARTRKGIELIPLDQVVY
FIADHKYVTLRHEAGEVLLDEPLKALEDEFGERFVRIHRNALVARDRIERLQRTPLGHFQLFLKGLNGDALIVSRRHVAG
VRKMMQGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-50 45
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_5488 YP_351216.1 two-component response regulator AlgR VFG0119 Protein 4e-102 82