Gene Information

Name : Pfl01_5372 (Pfl01_5372)
Accession : YP_351100.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 6035176 - 6035625 bp
Length : 450 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGATCGGAGAACTGGCGAAACAGACCGATTGCGCCGTGGAAACCATCCGCTACTACGAGCGTGAAAACCTGCTGCC
GGAACCGGCCCGCAGCGATGGCAACTACCGCGTCTACACCCAGGCCCACGCCGAGCGCCTGACTTTCATCCGCAACTGCC
GCACCCTCGACATGACACTCGAAGAAATCCGCAGCCTGCTCGCCTTGCGCGACAGCCCGCAGGATCAATGCGAAAGCGTG
AATGCGCTGATCGACGAGCACATCCAGCACGTCAAGGCGCGAATCGATGGGTTACTGGCGTTGCAGACGCAACTGCTCGA
GCTGCGCCAGCGCTGTGGCGAAGGGCCGGAGGCGGATCAGTGCGGGATCCTGCAGCGGCTGGAAGTCAGTGGCGGAGTTG
TGGCGACGGAGGTTGAGCATTCGCATGTGGGCAGAAGCCACGGTCATTAA

Protein sequence : 
MKIGELAKQTDCAVETIRYYERENLLPEPARSDGNYRVYTQAHAERLTFIRNCRTLDMTLEEIRSLLALRDSPQDQCESV
NALIDEHIQHVKARIDGLLALQTQLLELRQRCGEGPEADQCGILQRLEVSGGVVATEVEHSHVGRSHGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 8e-31 52
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-28 50
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-28 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-28 50
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-28 50
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-28 50
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 7e-29 50
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 7e-29 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_5372 YP_351100.1 MerR family transcriptional regulator BAC0058 Protein 6e-48 79
Pfl01_5372 YP_351100.1 MerR family transcriptional regulator BAC0301 Protein 5e-33 55