Gene Information

Name : Pfl01_5371 (Pfl01_5371)
Accession : YP_351099.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Resistance
Product : heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 6032782 - 6035091 bp
Length : 2310 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGATTCCCTGCACACCCACAAGCCCGGCGACGGGCACGATCACAGTCACACACTGCAGCCTGTGCATAAACATGC
CTACGCCGGCGATTCCTGTTGCGGGTCGAAAACCGTTACGCCTGCGCCGGTTCATTCGAGTGAAGACTCGTGCTGTTCGT
CGAAAGTCGCCGCACCTTCGCTTGTTCAACTGAGTGAGGCAAAAAGCGCCGACGCCCGGTTGAGCAGCTTCCGCATCGAA
GCGATGGACTGCCCGACCGAACAGACGCTGATCCAGAACAAGCTCGGCAAACTGGCCGGGATCCAGCAGCTGGAATTCAA
CCTGATCAATCGCGTGCTCGGCGTGACCCACAATCTGCCGGACACCGCGCCAATCATCGACGCGATCAAATCCCTCGGCA
TGCAGGCCGAGCCGCTGGAGGCGGGCGTTGAATCGACGGTTGCAGCGCCGGTGAAAAAACATTGGTGGCCACTGGCGCTG
TCCGGCGTCGGTGCGCTCGCTGCCGAAGTGATCCACTTCACCAGCGCCGCGCCGACCTGGGTGGTGGCGATCATCGCGCT
GACTTCCATCCTCAGCGGCGGCCTCACCACCTACAAGAAGGGCTGGATCGCCCTGAAGAACCGCAACCTCAACATCAACG
CCCTGATGAGCATCGCCGTGACCGGCGCCGTATTGATCGGCCAATGGCCGGAAGCAGCGATGGTGATGTTCCTGTTCACC
GTGGCCGAGCTGATCGAAGCGCGCTCGCTGGATCGCGCACGCAATGCCATCAGCGGCCTGATGCAGATGACGCCGGAGCA
GGCAACGGTGTTGCAGGCGGATGGCAACTGGGTCGAGCTCGACGTCAAAAGCATCGATCTCGGCGCCCGCGTGCGGGTGA
AACCCGGTGAACGCATCGCGCTGGACGGTGAAGTCGTCAGCGGCAGTTCGACCATCGATCAGGCGCCGATCACCGGTGAA
AGCCTGCCGGTGGAGAAAACCGTCGGCGACAAAGTGTTCGCCGGCACCATCAACCAGGCCGGTTCGCTGGAATATGCGGT
GACTGCAGCGGCGAACAATTCCACCCTGGCGCGAATCATCCACGCCGTGGAGCAGGCGCAAGGCGCGCGGGCGCCGACCC
AGCGTTTCGTCGATCAGTTCTCGAAAATCTACACCCCGGTGGTCTTCGTCCTGGCCCTGGCCGTGGCGATCATCCCGCCG
CTGTTCATGGCCGCCGCGTGGTTCGACTGGATTTATCGCGCGCTGGTGCTGCTGGTGGTCGCTTGCCCGTGTGCGCTGGT
GATTTCCACCCCGGTGACCATCGTCAGCGGCCTTGCGGCAGCAGCGCGCAAAGGCATTCTGGTCAAGGGCGGCGTGTACC
TGGAGGGCGGTTTCAAGCTCGACTATCTGGCCCTCGACAAGACCGGCACCATCACCCACGGCAAACCGGTACAGACCGAT
TACCTGTCCCTCGACCCGACCGCCGACGCCACGGCCCCGGCCATTGCCGCCGCGCTGGCCGGTCGCTCCGATCACCCCGT
ATCGCTGGCCATCGCCAACGCGGCTGTGGATAAAGGTTTCGCGGCTCTGCTTGTGGATAACTTCGAAGCGCTGGCTGGCC
GTGGGGTAAAAGGCGAGGTCAACGGTCAGGTCTACCACTTGGGCAACCACCGACTGGTGGAAGAACTGGGCCTGTGTTCG
CCGCAACTGGAAGAAAAGCTGTTCGCACTGGAGAAACAAGGCAAGTCCGTGGTGTTGCTGCTCGACAGCTCCGGCCCGCT
GGCGCTGTTCGCCGTGGCCGACACGGTCAAGGAAACCAGCCGCGAAGCGATCCGCCAACTGCACGATCTGGGCGTGAAAA
CCCTGATGCTGACCGGCGACAACGTCCACACCGCGCAAGCGATTGCGGCGCAGGTCGGGATCGATCAGGCCAAGGGCGAC
TTGCTGCCGACCGACAAACTGCAAGCCATCGAAGACCTTTACGCCAAAGGGCGCCGGGTCGGCATGGTCGGCGACGGCAT
CAACGACGCACCGGCACTGGCTCGGGCCGAGATCGGTTTTGCGATGGCGGCGGCCGGCACCGATACGGCGATCGAAACCG
CCGATGTCGCCCTGATGGACGACGATCTGCGCAAGATACCGGCCTTCATCAGCCTGTCGCGTCATACCGCCGCTATCCTG
AAACAGAACATCGCACTGGCGCTGGTGATCAAAGCGATCTTTCTTGGGGTAACCTTCGCCGGGCTCGCCACCATGTGGAT
GGCGGTGTTTGCCGACATGGGCGTGAGCCTGCTGGTGGTGTTCAACGGTTTGCGCCTGCTGCGCAAATAG

Protein sequence :
MSDSLHTHKPGDGHDHSHTLQPVHKHAYAGDSCCGSKTVTPAPVHSSEDSCCSSKVAAPSLVQLSEAKSADARLSSFRIE
AMDCPTEQTLIQNKLGKLAGIQQLEFNLINRVLGVTHNLPDTAPIIDAIKSLGMQAEPLEAGVESTVAAPVKKHWWPLAL
SGVGALAAEVIHFTSAAPTWVVAIIALTSILSGGLTTYKKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVMFLFT
VAELIEARSLDRARNAISGLMQMTPEQATVLQADGNWVELDVKSIDLGARVRVKPGERIALDGEVVSGSSTIDQAPITGE
SLPVEKTVGDKVFAGTINQAGSLEYAVTAAANNSTLARIIHAVEQAQGARAPTQRFVDQFSKIYTPVVFVLALAVAIIPP
LFMAAAWFDWIYRALVLLVVACPCALVISTPVTIVSGLAAAARKGILVKGGVYLEGGFKLDYLALDKTGTITHGKPVQTD
YLSLDPTADATAPAIAAALAGRSDHPVSLAIANAAVDKGFAALLVDNFEALAGRGVKGEVNGQVYHLGNHRLVEELGLCS
PQLEEKLFALEKQGKSVVLLLDSSGPLALFAVADTVKETSREAIRQLHDLGVKTLMLTGDNVHTAQAIAAQVGIDQAKGD
LLPTDKLQAIEDLYAKGRRVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFISLSRHTAAIL
KQNIALALVIKAIFLGVTFAGLATMWMAVFADMGVSLLVVFNGLRLLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 67
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 7e-116 46
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 9e-115 42
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 1e-114 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_5371 YP_351099.1 heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase BAC0298 Protein 0.0 67