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Name : Pfl01_5125 (Pfl01_5125) Accession : YP_350853.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Virulence Product : spermidine/putrescine ABC transporter ATP-binding subunit Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 5758005 - 5759129 bp Length : 1125 bp Strand : - Note : - DNA sequence : ATGAGCCAGGTCGAATCAAACGCAGGGGCCAGCGATGTGCTGGTCAGCTTTCGTGGAGTGCAGAAGAGCTACGACGGCGA GAACCTGATCGTCAAAGACCTCAACCTGGACATTCGCAAGGGCGAATTCCTCACCTTGCTCGGACCGTCCGGCTCCGGAA AGACCACCAGCCTGATGATGCTCGCCGGTTTCGAGACGCCGACCGCCGGCGAAATTCTCCTTGCCGGGCGGGCGATCAAC AACGTGCCGCCGCACAAGCGCGACATCGGCATGGTGTTCCAGAACTACGCGCTGTTTCCGCACATGACCGTCGCCGAAAA CCTGGCGTTTCCGCTGACCGTACGCGGCCTGAACAAGAGCGACGTCAGCGACAAGGTTAAGAAAGTCCTGAGCATGGTTC AGCTCGACGCGTTCGCATCGCGTTATCCGGCGCAGTTGTCCGGCGGCCAGCAACAACGTGTAGCACTGGCCCGTGCGCTG GTGTTCGAGCCGCAGCTGGTGCTGATGGACGAACCCCTCGGCGCCCTCGACAAACAACTGCGCGAACACATGCAGATGGA AATCAAACACCTGCACCAGCGCCTTGGCGTAACCGTGGTCTATGTGACCCACGACCAGGGCGAAGCCCTGACCATGTCCG ACCGCGTCGCCGTGTTCCACCAGGGCGAGATCCAGCAGATCGCCCCGCCGCGCACCCTCTACGAAGAACCGAAAAACACC TTCGTCGCCAACTTCATCGGCGAGAACAACCGCCTCAACGGTCGCCTGCTCAGCCAGAACGGCGAGCGCTGCGTGGTCGA GCTGGGGCGCGGGGAAAAGGTCGAGGCGCTGGCGGTCAACATCGGCCAGACCGGCGAACCGGTCACCCTGTCTATCCGCC CCGAGCGCGTCAGCCTCAACGGTTCGAGCGACCAATGCGTCAACCGCTTCTCCGGGCGGGTGGCCGAATTCATCTATCTG GGCGACCACGTCCGGGTGCGCCTGGAAGTCTGCGGCAAGACCGACTTCTTCGTGAAACAACCGATTGCCGAGCTCGATCC TGCGCTCGCAGTCGGTGACGTGGTTCCGCTTGGCTGGCAGGTCGAGCACGTTCGCGCGCTCGATCCTCTTCTAGAGGCGC ACTGA Protein sequence : MSQVESNAGASDVLVSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLAGRAIN NVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGLNKSDVSDKVKKVLSMVQLDAFASRYPAQLSGGQQQRVALARAL VFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT FVANFIGENNRLNGRLLSQNGERCVVELGRGEKVEALAVNIGQTGEPVTLSIRPERVSLNGSSDQCVNRFSGRVAEFIYL GDHVRVRLEVCGKTDFFVKQPIAELDPALAVGDVVPLGWQVEHVRALDPLLEAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pfl01_5125 | YP_350853.1 | spermidine/putrescine ABC transporter ATP-binding subunit | VFG1206 | Protein | 4e-38 | 42 |
