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Name : Pfl01_0492 (Pfl01_0492) Accession : YP_346225.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 570117 - 572006 bp Length : 1890 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGACTACAAAATCTAAAAATGCGATCAACCTGAGTGACTCGGCCAAGGTCGACGAGCAGTCGGTCCAACCGTTCACCCG TTCGCAAAAAGTCTACGTTCAGGGCTCCCGCCCGGACATCCGCGTGCCGATGCGCGAAATCACCCTCGATGTGACCCCGA CCGACTTTGGCGGCGAAATCAATGCGCCGGTCACCGTCTACGACACCTCGGGCCCGTACACCGATCCGAACGTGGTGATC GACGTGCGCAAAGGTCTGGGCGACGTGCGTTCGGCGTGGATCGACGACCGTGGCGACACCGAGCGTCTGCCAGGCCTGAG TTCCAACTTCGGCCAGGAACGCCTCGCCGACCCAGAGCTGACCAAACTGCGTTTTGCCCACGTCAACAACCCGCGCCGGG CCAAGGCCGGGGCCAACGTCAGCCAGATGCACTACGCGCGCAAAGGCATCATCACCGCCGAGATGGAATACGTCGCCATC CGCGAAAACATGAAGCTGCAAGAGGCCCGCGCCGCCGGCCTGTTGAAGCAGCAACATGCCGGCCACAGCTTCGGCGCGAG CATCCCGAAAGAAATCACCCCTGAATTCGTGCGCGAAGAAATCGCCCGCGGCCGCGCGATCATCCCGGCCAACATCAACC ACGTCGAACTGGAACCGATGATCATCGGTCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGCGCGCTGGGT TCGTCCATCGAAGAAGAAGTGGCGAAACTGACCTGGGGCATTCGCTGGGGCTCGGACACGGTGATGGACTTGTCCACCGG CAAGCACATTCACGAAACCCGCGAGTGGATCATCCGTAACTCGCCAGTGCCGATCGGTACGGTGCCGATTTATCAGGCGC TGGAAAAAGTGAATGGCGTCGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACGCTGATCGAGCAGGCAGAGCAGGGC GTCGACTACTTCACCATCCACGCCGGCGTGTTGCTGCGCTACGTGCCGCTGACCGCCAAGCGCGTGACCGGCATCGTTTC CCGTGGCGGTTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAAGAGAACTTCCTCTACACCCACTTCGACGAAATCT GCGAAATCATGAAGGCCTACGACGTCAGCTTCTCGCTGGGCGATGGTCTGCGTCCGGGCTCGATTGCCGACGCCAACGAC GAAGCGCAATTCGGCGAACTGGAAACCCTCGGTGAGCTGACCAAGATCGCCTGGAAGCACGACGTGCAATGCATGATCGA AGGCCCGGGCCACGTGCCGATGCAGCTGATCAAAGAGAACATGGACAAGCAGCTGGAGTGCTGCGACGAGGCGCCGTTCT ACACCCTCGGCCCGCTGACCACCGACATTGCGCCGGGCTACGACCACATCACCTCCGGCATCGGTGCGGCGATGATCGGC TGGTTCGGTTGCGCGATGCTCTGCTACGTGACGCCGAAGGAGCACCTGGGTCTGCCGAACAAGGATGACGTGAAGACCGG GATCATCACCTACAAGATCGCCGCTCACGCCGCGGACCTGGCCAAGGGGCATCCGGGCGCGCAGATCCGCGACAACGCCT TGAGCAAGGCGCGTTTCGAATTCCGTTGGGAAGACCAGTTCAACCTCGGTCTGGACCCGGACACCGCTCGTTCGTATCAC GATGAAACCTTGCCGAAGGACTCGGCGAAGGTCGCGCATTTCTGTTCGATGTGCGGGCCGAAGTTCTGCTCGATGAAGAT CACCCAGGAAGTTCGCGAATACGCGGCCAACCAGCGGATCGACGCGGTCGACGTGGACGTCGCCCAGGGCCTGGCGGAAC AGGCCGAGCGGTTCAAGAAGGAAGGCAGTCAGCTGTACAAGAAGGTTTGA Protein sequence : MTTKSKNAINLSDSAKVDEQSVQPFTRSQKVYVQGSRPDIRVPMREITLDVTPTDFGGEINAPVTVYDTSGPYTDPNVVI DVRKGLGDVRSAWIDDRGDTERLPGLSSNFGQERLADPELTKLRFAHVNNPRRAKAGANVSQMHYARKGIITAEMEYVAI RENMKLQEARAAGLLKQQHAGHSFGASIPKEITPEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQG VDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADAND EAQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYH DETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIDAVDVDVAQGLAEQAERFKKEGSQLYKKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 76 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 76 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 74 |
