Gene Information

Name : Pfl01_4822 (Pfl01_4822)
Accession : YP_350550.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : type 4 prepilin peptidase
Function : -
COG functional category : N : Cell motility
COG ID : COG1989
EC number : 3.4.23.43
Position : 5442636 - 5443508 bp
Length : 873 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTATCGACGAACTCTTCAGCCTGTATCCGCTGGCCTTTGTCTTCACCGCCCTGCTGCTGGGGCTGGTGGTCGGCAG
TTTCCTCAACGTGTTGATCTGGCGCCTGCCGAAAATGCTCGAGCGTGAATGGCGCCAGCAGGCTCACGATGTTTTGGGGC
TGCCCGGTGAAGCACCGTTACCCACTTACAACCTGATGCTGCCGCACTCCCAATGCCCGCACTGTGGCCACCGGATCCGG
GCCTGGGAAAACATTCCCGTGTTGAGTTACGTGTTTCTGCGCGGGCGCTGTTCAAGTTGCAGCGCACCGATCAGCAAGCG
TTACCCGCTGACCGAACTGGCCTGCGGCCTGCTCTCGGCGTTCATCGCCTGGCACCTGGGTTTCGGCTGGCCGGCGTGCC
TGCTGATCGTGCTGACCTGGGGCCTGTTGGCCATGAGCCTGATCGACACCGAACATCAATTGTTGCCCGACGTGCTGGTG
CTGCCGCTGCTGTGGCTGGGGCTGATCGTCAACAGCTTCGAGCTGTTCGTGCCGCTGCACGATGCCCTGTGGGGCGCGGT
GCTTGGGTACATGGCGCTGTGGTCGGTGTTCTGGCTGTTCAAACTGATCACCGGCAAGGACGGCATCGGTCACGGCGATT
TCAAGCTGCTGGCGCTGCTCGGGGCCTGGGGCGGCTGGCAGATTCTGCCGCTGACCATCCTGCTGTCTTCGCTGGTGGGC
GCCGTGCTCGGGGTGATTTTGCTCAAGCTGCGCGACCAGAAAACCTCGACGCCGATTCCCTTCGGCCCGTATCTGGCAAT
TGCCGGCTGGATTGCCTTGCTCTGGGGTGGTCAAATAACCGGCTTCTATTGGCAGTTTGTCGGTTTGAAATGA

Protein sequence : 
MPIDELFSLYPLAFVFTALLLGLVVGSFLNVLIWRLPKMLEREWRQQAHDVLGLPGEAPLPTYNLMLPHSQCPHCGHRIR
AWENIPVLSYVFLRGRCSSCSAPISKRYPLTELACGLLSAFIAWHLGFGWPACLLIVLTWGLLAMSLIDTEHQLLPDVLV
LPLLWLGLIVNSFELFVPLHDALWGAVLGYMALWSVFWLFKLITGKDGIGHGDFKLLALLGAWGGWQILPLTILLSSLVG
AVLGVILLKLRDQKTSTPIPFGPYLAIAGWIALLWGGQITGFYWQFVGLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85237.1 putative prepilin peptidase A Not tested PAI V 536 Protein 8e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_4822 YP_350550.1 type 4 prepilin peptidase VFG0114 Protein 9e-73 69
Pfl01_4822 YP_350550.1 type 4 prepilin peptidase VFG0234 Protein 6e-34 48
Pfl01_4822 YP_350550.1 type 4 prepilin peptidase VFG1882 Protein 2e-37 47