Gene Information

Name : Pfl01_4734 (Pfl01_4734)
Accession : YP_350462.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 5339377 - 5340339 bp
Length : 963 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCGACTCATCGACGTCCCTGCCAAAAATCGCCATCAGCGCCTGCCTGATGGGGGCCGAAGTTCGCTACAACGGCGG
CCACAAGGAATCGCGTTTGTGCAGCCGCACCCTGGCCGAGCATTTTGAGTTCGTTCCCGTCTGTCCTGAGGTAGCGATTG
GTCTCGGGATACCCCGCGAGCCGATTCGTCTGGTGGGCGACCCGCAAAAGCCTGATGCGGTCGGCACCGTCAATCCATCG
ATCAATGTTACCCAGCCACTGGCCGCTTACGGCGAGAAAATGGCCGGGGAACTCAGTGACATCTGCGGCTACATCTTCAT
GCAGCAATCGCCGTCCTGCGGACTGGAGCGGGTCAAGGTCTACCACGCCAACGGCGCACCGGTGAATGGTGGCGGGCGCG
GCATTTACGCCGACGCGTTCTGTGCACGGCATCCGGACCTGCCGGTGGAAGAAGCCGGGCGTCTTAATGATCCGGTGCTG
CGGGAAAATTTCATCACCCGCGTACTCGCCTACCGCGAATGGCAGCAAGTGCTCCAGCAAGGCTTGAGCCGCCGCGCGCT
CACCGACTTCCATTCGCGCTACAAATACCTGCTGATGGCTCACAATCCGGTGCAATACAAGGCGCTGGGCAATCTGCTGG
GCAACATGGGCCGGACCGACCCGATCGAACTGGGCCCACGCTATTTCAGTGAACTGATGGCGGCACTCAAGAAATGCGCC
ACCCGCCGCACCCACAGCAATGTCCTGCAGCACATCAGTGGCTACCTGAAGCAGGCCATCAGCCCAGAAGACAAACAGGA
AGTGCAGCACATCATCGGCCAATACCGACACGGCATCGTGCCGCTGGTGGTACCGCTGACGCTGCTCAAGCATCACTTTC
GCCTCCACCCGGATCCCTACATTGCGCAGCAGGTGTACCTGCAGCCGCATCCGGAAAACCTCAGTCTGCGAAACGCCATT
TGA

Protein sequence : 
MSDSSTSLPKIAISACLMGAEVRYNGGHKESRLCSRTLAEHFEFVPVCPEVAIGLGIPREPIRLVGDPQKPDAVGTVNPS
INVTQPLAAYGEKMAGELSDICGYIFMQQSPSCGLERVKVYHANGAPVNGGGRGIYADAFCARHPDLPVEEAGRLNDPVL
RENFITRVLAYREWQQVLQQGLSRRALTDFHSRYKYLLMAHNPVQYKALGNLLGNMGRTDPIELGPRYFSELMAALKKCA
TRRTHSNVLQHISGYLKQAISPEDKQEVQHIIGQYRHGIVPLVVPLTLLKHHFRLHPDPYIAQQVYLQPHPENLSLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 4e-60 41
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 5e-60 41
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 6e-60 41
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 6e-60 41
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 6e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_4734 YP_350462.1 hypothetical protein VFG0490 Protein 3e-60 41