Gene Information

Name : Pfl01_4498 (Pfl01_4498)
Accession : YP_350226.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5073156 - 5073839 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGCGAATTCTATTGGTCGAAGACAACCGCGATATCCTGGCCAATCTGGCCGATTACCTGGGGCTCAAAGGCTACACCGT
CGATTGCGCCCAGGACGGTCTGTCGGGCCTGCATCTGGCCGCCACCGAGCATTACGACCTGATCGTGCTCGACATCATGC
TGCCGGGCATCGACGGCTACACCCTGTGCAAGCGCTTGCGCGAAGACGCCCGTCGCGATACGCCGGTGATCATGCTCACC
GCCCGCGATCAGCTCGACGATCGCCTGCAGGGCTTCAAGTCCGGGGCCGACGATTATCTGGTCAAGCCGTTCGCGCTGTC
GGAACTGGCGGCGCGGGTCGAAGCGGTGATGCGTCGCACCCAGGGCGGCGGTCGCCGGGCCCTGCAGGTCGGCGATCTGA
GCTACGACCTCGATACCCTAGAAGTGACCCGCGAAGGCAAATTGCTCAAGCTCAACCCGGTCGGCCTCAAGCTGCTGGCA
GTGCTGATGCAAAAGAGCCCGCATGTCCTGCGTCGGGAAATTCTCGAAGAAGCGCTGTGGGGCGATGACTGCCCGGACAG
CGACAGCCTGCGCAGCCATGTCCACCAGTTGCGCCAGGTGATCGACAAACCGTTCGCCAAGCCATTGCTGCACACCGTGC
ACGGCGTGGGATACCGCTTGGCCGAGGGCCGCGATGGAGTTTAA

Protein sequence : 
MRILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYTLCKRLREDARRDTPVIMLT
ARDQLDDRLQGFKSGADDYLVKPFALSELAARVEAVMRRTQGGGRRALQVGDLSYDLDTLEVTREGKLLKLNPVGLKLLA
VLMQKSPHVLRREILEEALWGDDCPDSDSLRSHVHQLRQVIDKPFAKPLLHTVHGVGYRLAEGRDGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-32 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_4498 YP_350226.1 two component transcriptional regulator BAC0197 Protein 7e-35 42
Pfl01_4498 YP_350226.1 two component transcriptional regulator BAC0487 Protein 2e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_4498 YP_350226.1 two component transcriptional regulator VFG0596 Protein 5e-33 42
Pfl01_4498 YP_350226.1 two component transcriptional regulator VFG1390 Protein 6e-31 41