Gene Information

Name : Pfl01_0417 (Pfl01_0417)
Accession : YP_346150.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 478941 - 479837 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
ATGGAATTGCGTCATCTGCGCTACTTCATCGCCGTCGCCGAAGAACTGCACTTCGGCCGCGCCGCTCAGGTGCTGGGCAT
CTCCCAGCCACCGCTGAGCCAGCAGATCCAGGCGCTGGAACAGGAAGTCGGCGCGCGACTGTTCGAGCGGACCAATCGTC
GGGTCGAGCTCAGCGAGGCCGGGCGACTGTTTCTGGAGGAAGCGCGGCTGGTGCTCGCGCAAGTCGATAAAGCGGCCGAC
GTGGCTCGCCGTGCACAACTCGGCGAGCTGGGTGAGCTGAAGATCGGCTTCACCTCGTCGGCGCCGTTCAACTCGACCAT
TCCCCAGGCGATTTTTTCCTTCCGCCAGCGCTTCCCCGCCGTGCACCTGAATCTGCGCGAGATGAGCAGCACCATGGTCG
CCGACGCGCTGGTGGACGAATCGATCGAAGTCGGCATCATGCGACCGCTGGGTTTGCCGGATTCGCTCAGTGTGGTCGAA
CTGATGCGCGAGCCGCTGGTGGCCGTGCTCAGTTCCAAGCATCCGCTGGCGCAGGGCTCTGAAGAGGGGCTGTTCCTCTC
GGCGCTGGCCCTGGAGCCGTTCGTGTTTTTCCCGCGCAGTTACGGCAGTGGTCTGTATTCACAGTTGATCAGCCTGGCCC
GCGACGCGGGATTCAGTCCGCACTTTGCCCAGGAGGCCGGCGAAGCAATGACCATCATCGGTCTGGTGGCAGCCGGCCTG
GGCGTGTCGGTCATGCCGGCCTCGTATCAACGGATGCGCATCGACGGCGTGGTCTACCGACCGCTGCTCGATCCCGAGGC
CGTGACGGCGGTTTGGCTGGTGCAGCGCAAGGACCAGAAATCGCCGATGGCCAAGGCGTTTGTCGAACTGCTCACGCGCA
AGGTCGACGCCGGTTGA

Protein sequence :
MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEAGRLFLEEARLVLAQVDKAAD
VARRAQLGELGELKIGFTSSAPFNSTIPQAIFSFRQRFPAVHLNLREMSSTMVADALVDESIEVGIMRPLGLPDSLSVVE
LMREPLVAVLSSKHPLAQGSEEGLFLSALALEPFVFFPRSYGSGLYSQLISLARDAGFSPHFAQEAGEAMTIIGLVAAGL
GVSVMPASYQRMRIDGVVYRPLLDPEAVTAVWLVQRKDQKSPMAKAFVELLTRKVDAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 1e-49 43