|
Name : Pfl01_4032 (Pfl01_4032) Accession : YP_349760.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 4556969 - 4559035 bp Length : 2067 bp Strand : - Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGAATATGCATGTTCCAGCTTCAAAACCAGCGGCAGCTGCCAAGTCGGCTGAAGCTCCGAAAACCGCGATCAGCGCCCT GTGGCGCCCGGCGCTGGTGCAAGCGTTCGTCAAGCTCGACCCGCGGCAGTTGCAGCGCTCGCCAGTGATGCTGGTGGTCG AACTGACAGCGATCCTGACCACCGTGCTGTGCTTCATTCCCGACAGCAGCGTGCCGACCTTCGTTGCTGCGCAAATCGCC CTGTGGCTGTGGTTCACCGTGCTGTTCGCCAACTTCGCCGAAGCGCTGGCCGAAGGTCGCGGCAAGGCCCGCGCCGACAG CCTCAAGGCCGGCAGCGAAGGCCTCAGCGCCCGACGCAAACTGGCCAACGGCAGCTTCCAGGTCGTACCGGCCAGCAGCC TGCGCAAGGGCGATGTGGTGCGCGTTGAAGCCGGCGAAATGATCCCCGGTGACGGCGAGGTCATCGAAGGCATTGCGGCG GTCAACGAAGCAGCGATCACTGGCGAATCGGCGCCGGTGATCCGCGAGTCCGGCGGCGACCGTTCCGCCGTTACCGGCAA CACCCGGCTGGTGTCCGACTGGCTGCTGGTGAAGATCACCGCCAATCCTGGTGAATCGACCCTCGACCGCATGATCGCGC TGGTCGAAGGCGCCAAACGCCAGAAGACCCCGAACGAAGTGGCACTGGACATCCTGCTGATCGGCCTGACCCTGATCTTC CTGCTGGTGGTCGTGACCCTGCAACCGTTCGCCCACTTCGCTAACGGCAGCCTGCCGCTGGTGTTCCTGGTGGCGTTATT GGTCACGCTGATTCCGACCACCATCGGCGGTCTGCTGTCGGCGATCGGTATCGCCGGGATGGATCGTCTGGTGCGCCTGA ACGTGATCGCCAAGTCCGGTCGCGCGGTGGAAGCGGCGGGTGACGTGCACGTGTTGCTGCTGGACAAGACCGGCACCATC ACCTTCGGTAACCGTCGTTGCAGCGCGGTATATGCCGCGCCGGGTGTGAACGCCCGTGAGCTGGCCGAAGGCGCGCTGTT CGCCTCGCTGGCCGACGAAACCGCTGAAGGCAAGTCCATCGTCGAGTACCTGCGCGGCTCCAATCCGCAGCCGGAACCTT CGCCGGAAACCCTGACTGCCGTGCCGTTCAGTGCGGAAACCCGTTTGTCCGGTGTCGACTACCAGGGCCGTGTGTTCCGC AAGGGCGCGGTGGATTCGCTGCTGGCGTTCCTTGGTCAGCAACGCAAGGATCTGGCCCCGGCGCTGTCCCGGGAAATCGA CAAGATCGCCCAGAGCGGCGGCACCCCGTTGCTGGTCTGCGCCGACGGCAAACTGCTTGGTGCGATCCACCTCAAAGACG TGGTCAAGCCGGGCATCCGCGAGCGCTTCGCCGAGCTGCGCAAACTGGGGATTCGCACGGTGATGGTGACTGGCGACAAC CCGCTGACCGCTGCCGCGATTGCCGCTGAAGCGGGCGTCGACGATGTATTGGCCGAAGCCACACCGGAGAAAAAACTGGC GCGTATCCGTCACGAGCAGAACGACGGTCGTCTGGTCGCGATGTGCGGCGACGGCGCCAACGATGCTCCGGCGCTGGCCC AGGCTGACGTCGGCATGGCGATGAACGACGGCACACAAGCCGCGCGTGAGGCGGCCAACATGGTCGACCTCGACAGCGAC CCGACCAAGTTGCTGGACGTGGTGCAGATCGGCAAGGAATTGCTGGTGACTCGCGGTGCGCTGACGACCTTTTCCATCGC CAACGACGTGGCCAAGTACTTTGCGATCCTGCCGGCACTGTTTGCTGCGATCTACCCGCAACTGGGTGTGCTGAACATCA TGCAGTTGAGCAGCCCGCAGAGCGCGATCCTGTCAGCCATCGTGTTCAACGCTTTGATCATCGTGGTGCTGATTCCGTTG GCCCTGCGTGGTGTGCGGGTGCAGGCGGCGAGCGCGGCGGCGCTGCTGCGTCGCAATCTGCTGATCTATGGCCTGGGCGG GATTCTGGTGCCGTTCGTGGGGATCAAGGCGATCGACATGCTGTTGACGGCGTTGCATCTGGTTTGA Protein sequence : MNMHVPASKPAAAAKSAEAPKTAISALWRPALVQAFVKLDPRQLQRSPVMLVVELTAILTTVLCFIPDSSVPTFVAAQIA LWLWFTVLFANFAEALAEGRGKARADSLKAGSEGLSARRKLANGSFQVVPASSLRKGDVVRVEAGEMIPGDGEVIEGIAA VNEAAITGESAPVIRESGGDRSAVTGNTRLVSDWLLVKITANPGESTLDRMIALVEGAKRQKTPNEVALDILLIGLTLIF LLVVVTLQPFAHFANGSLPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLDKTGTI TFGNRRCSAVYAAPGVNARELAEGALFASLADETAEGKSIVEYLRGSNPQPEPSPETLTAVPFSAETRLSGVDYQGRVFR KGAVDSLLAFLGQQRKDLAPALSREIDKIAQSGGTPLLVCADGKLLGAIHLKDVVKPGIRERFAELRKLGIRTVMVTGDN PLTAAAIAAEAGVDDVLAEATPEKKLARIRHEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSD PTKLLDVVQIGKELLVTRGALTTFSIANDVAKYFAILPALFAAIYPQLGVLNIMQLSSPQSAILSAIVFNALIIVVLIPL ALRGVRVQAASAAALLRRNLLIYGLGGILVPFVGIKAIDMLLTALHLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-150 | 59 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-150 | 59 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-126 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-125 | 54 |
