Gene Information

Name : Pfl01_3983 (Pfl01_3983)
Accession : YP_349711.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 4511731 - 4512942 bp
Length : 1212 bp
Strand : +
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGCAGTTCAGCAAATCGAACAAGCTCGCCAACGTCTGCTACGACATTCGCGGCCCGGTGCTCAAGCACGCCAAACGCCT
GGAAGAGGAAGGCCATCGCATCCTCAAGCTGAACATCGGCAACCCGGCACCCTTTGGTTTCGAAGCGCCAGACGAAATTC
TCCAGGATGTGATCCGCAACCTGCCGACCGCCCAGGGCTACAGCGATTCCAAAGGCCTGTTCAGCGCGCGCAAGGCGGTG
ATGCAGTACTACCAGCAGAAGCAGGTCGAAGGTGTCGGCATCGAAGACATCTATCTGGGCAACGGCGTGTCCGAGCTGAT
CGTGATGTCGCTGCAGGCACTGCTCAACAACGGTGACGAAGTGCTGGTGCCGGCGCCAGACTACCCGCTGTGGACCGCAG
CCGTGAGCCTGGCCGGCGGTAACGCTGTGCATTACCTGTGCGACGAGGGCGCCGACTGGTTCCCGGACCTGGCCGACATC
AAGGCCAAGATCACCCCGAACACCAAGGCGATGGTGATCATCAACCCGAACAACCCGACCGGCGCGGTGTATTCGAAGGA
AGTGCTGTTGGGCATGCTCGAACTGGCTCGCCAGCACAATCTGGTGGTGTTCTCCGACGAAATCTACGACAAGATTCTTT
ACGACGACGCCGTGCACATCTGCACCGCTTCGCTGGCCCCGGACCTGCTGTGCCTGACCTTCAACGGCCTGTCCAAGTCG
TATCGCGTGGCGGGTTTCCGTTCCGGCTGGATCGCCATTTCCGGGCCGAAACACAACGCTCACAGCTACATCGAAGGCAT
CGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGAGTCAGCATGCGATCCAGACCGCCCTGGGTGGCTATCAGA
GCATCAACGATCTGGTACTGCCGCAAGGTCGCCTGCTGGAACAGCGCAACCGCACCTGGGAGCTGCTCAACGACATTCCC
GGCGTTAGCTGCGTGAAGCCGATGGGCGCACTGTACGCGTTCCCGAAGATCGACCCGAAAGTCTGCCCGATCCACAACGA
CGAGAAATTCGTGCTCGACCTGCTGCTCTCCGAGAAGCTGCTGGTGGTGCAGGGCACGGCGTTCAACTGGCCGTGGCCTG
ACCACTTCCGCGTGGTCACCCTGCCGCGGGTCGATGACCTGGACATGGCCATCGGTCGCATCGGCAACTTCCTCAAGTCC
TACCGCCAGTAA

Protein sequence :
MQFSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYYQQKQVEGVGIEDIYLGNGVSELIVMSLQALLNNGDEVLVPAPDYPLWTAAVSLAGGNAVHYLCDEGADWFPDLADI
KAKITPNTKAMVIINPNNPTGAVYSKEVLLGMLELARQHNLVVFSDEIYDKILYDDAVHICTASLAPDLLCLTFNGLSKS
YRVAGFRSGWIAISGPKHNAHSYIEGIDMLANMRLCANVPSQHAIQTALGGYQSINDLVLPQGRLLEQRNRTWELLNDIP
GVSCVKPMGALYAFPKIDPKVCPIHNDEKFVLDLLLSEKLLVVQGTAFNWPWPDHFRVVTLPRVDDLDMAIGRIGNFLKS
YRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-124 64
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-124 64
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-124 64
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-124 64