Gene Information

Name : Pfl01_3935 (Pfl01_3935)
Accession : YP_349663.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4449196 - 4449876 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGCACGTACTGGTTTGCGAAGACGATGAGTTGATCGCCAGCGGGATCGTCGCCGGGCTGACGGCGCAAGGCCTGACGGT
CGAGCACGTCAACACGGCCTCCAAGGCGCGGGCGATTCTCAAGGTTGCCGAATTTGACGTGATGGTGCTCGATCTCGGGC
TGCCGGACGAAGATGGTCTCAAGTTGCTGCAACAACTGCGTCAGCAAGGCCTGGAGATTCCGGTGCTGATCCTGACTGCA
CGGGATTCGGTCACGGATCGGGTCGACGGCTTGCAATCCGGCGCCGACGACTACCTGCTCAAGCCGTTCGACCTGCGCGA
GTTGTTCGCCCGCCTGCAAACCCTGCTGCGCCGGGTGGCCGGACGCAGCGTCAATCTGATCGAACACGGCGCGCTGACTT
ACGATCCGAGCAGTCGCGAAACCACCCTGGCGGGGCGTCCGGTGGATCTGTCGCGGCGCGAGCAGTCGTTGTTGCAAGCC
TTGCTGCACAACCGTGGCCGGGTGCTGTCCACCGAGCAGTTGAAGGACAGCGTCTACGGTTTCAACGATGAACTGGAAAG
CAACGCGCTCAATGTGCACATCCATCACCTGCGCAGCAAACTCGGCAAAGGCATCGTCGAAACCGTGCGCGGTCTGGGTT
ATCGCCTGGGCCCGGCCGATGGCGGAGAACCCGACAAGTGA

Protein sequence : 
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAILKVAEFDVMVLDLGLPDEDGLKLLQQLRQQGLEIPVLILTA
RDSVTDRVDGLQSGADDYLLKPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETTLAGRPVDLSRREQSLLQA
LLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSKLGKGIVETVRGLGYRLGPADGGEPDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-48 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_3935 YP_349663.1 two component transcriptional regulator BAC0487 Protein 2e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_3935 YP_349663.1 two component transcriptional regulator VFG1389 Protein 6e-24 43
Pfl01_3935 YP_349663.1 two component transcriptional regulator VFG0473 Protein 3e-36 42