Gene Information

Name : Pfl01_3858 (Pfl01_3858)
Accession : YP_349586.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4359593 - 4360291 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAGTCGGGCATGAGTGAAAAAGCAATCTTGAGCTGCCGCAACCTGGGCAAATCCTACGAGGAAGGCCCGGAGTC
GGTGGAAGTGCTGGCCAACCTGCAACTGGAACTGCATCCAGGCGAGCGGGTGGCGATCGTCGGCAAGTCCGGTTCGGGCA
AAAGTACCTTGCTCAACCTGTTGGGCGGTCTCGACACGCCGACCAAGGGCGGTGTCTGGCTCGACGGTGAAGAACTGTCG
GCGCTGAGCGAGAAAAAGCGTGGCCTGCTGCGTAACCGTGCCCTCGGGTTCGTGTACCAGTTCCACCACTTGCTGCCGGA
ATTCACCGCGCTGGAAAACGTCTGCATGCCGCTGCTGATCGGCAAGACCGCGATCCCGGAAGCCCGTCAGCGTGCCACGG
CGTTGCTGGAGCGAGTGGGCCTGGGCCATCGCCTGGAACACAAACCGGCGGAGCTGTCCGGTGGCGAACGCCAGCGTGTG
GCCATCGCCCGTGCGCTGGTCAACAATCCAGGACTGGTGATGCTCGACGAGCCGACCGGCAACCTAGACTCCCACACCGC
TGAGGGCATTCAGGATCTGATGCTGGAACTCAGCACGTCGATGCGCACGGCGTTTCTGGTGGTGACTCACGACATGAACC
TGGCTCGCCAGATGGACCGCGTCCTGCAGCTGCAGGAAGGTTGCCTGACCCCCATCTGA

Protein sequence : 
MSESGMSEKAILSCRNLGKSYEEGPESVEVLANLQLELHPGERVAIVGKSGSGKSTLLNLLGGLDTPTKGGVWLDGEELS
ALSEKKRGLLRNRALGFVYQFHHLLPEFTALENVCMPLLIGKTAIPEARQRATALLERVGLGHRLEHKPAELSGGERQRV
AIARALVNNPGLVMLDEPTGNLDSHTAEGIQDLMLELSTSMRTAFLVVTHDMNLARQMDRVLQLQEGCLTPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_3858 YP_349586.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 4e-40 44
Pfl01_3858 YP_349586.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 9e-33 43