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Name : Pfl01_3844 (Pfl01_3844) Accession : YP_349572.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : lipopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3206 EC number : - Position : 4345611 - 4347833 bp Length : 2223 bp Strand : - Note : - DNA sequence : ATGCAGTTACCGTCAGTAATCGGCACCCGTGAAAATGATCAAGACAGTATTGATCTTCTCGGCATCTTCGGCAGCCTGAT CGATCAGAAGTGGTTGATCGGTGCGTTCACCGGCGCATTCATGATGACCGGTGTGGCCTATGCGATTTTGGCCACGCCGG TGTATCTGGCCAATGCGTTGGTGCAGGTCGAACCGAAAAAGAACGACATGCTCGGTTTTTCCGACCTCAACAGCATGCTC GGCGGGCAATCGCCGTCGGTGACCGAAATCGGCATCATCAAATCCCGCGCGGTGATCGGCAAGACAGTCGACGACCTGCG CCTGGACATCGACGTCACCCCCAACACCTTTCCGCTGATTGGCGGCTTTCTTTCCCGGCGTTATCGCGGCGAGACCGAAC TCAGCGTCGCGCCGCCGCGCTTCGGCCTGAGCAGCTACGCCTGGGGCGGTGAACGCCTGGAGTTTGCCAAGCTCAATCTG CCCAAGGAGCTGCTGGGCAAGAAACTCACCCTGATCGCCGGCGAACAACATCGCTTCCAACTGCTCGACGACAACGACAA CCTGCTGGTCGACGGTGTGGCGGGCGAAGCCTTCGCCCAGGACGGCGTAGAAGGGCAGATCGCGCAGCTGTTGGCCAACC CCGGGACCCGTTTCGAAGTGGTGCGCTACCCACGAATCGTGACCATTCAGGGTTATCAGGACGCGCTGGACATCTCCGAG CAAGGCAAGGAATCGGGGATCATCCGTCTGGCCCTGGCCAGCAGCGACGCCGCCGAAGCGGTGAAGATCCTCAACAAGAT CGCTTCGCTGTACGTCGATCAGAACGTGCGCCGCACCTCGGCCGAAGCGGCGCAGAGCCTGGCCTTCCTGCAAAGCCAGT TGCCGCAGGTCAAACGCGATCTGGCCAAGGCCAGCGATGCGCTCAACGCCTATCAGACCCACGGCAAGACCGTGAACATC TCGCTGGAAACCCAATCGGTGCTCGGCCAGTCCGTGGCGCTCGAAACGCGGATTTCCGAGCTGAAACTGCAACAGGCGGA GATGGATCGCAAGTTCACCAAACAGCACCCGGCCTACCGCGCGCTGATGACCCAGATTGGCGAATTGACCCAGCAACAGC GCTCGCTGGAAGGCAAGGTTCAGGACCTGCCGGCCACGCAGCAGGAACTGCTCAACCTGACCCGCGATGTCGAAGTCGCC TCGCAGATCTACACCCAGTTGCTGAACAAATCCCAGGAGCTGGACATTATCCGCGCCGGTGCCGTGGGTAACGTGCGTCT GGTGGATACGGCGGACGTCGACCTGACCAGCCCGGTCAAACCGAAAAAAGCCCTGATCGTGTTGATCGCCACCTTCCTCG GCGCCTTCGTCGGCGTGGCGCTGGTGCTGTTGCGCAAATCCCTGAGCAAGGGCCTGGAAGGGCCGGAAGCCATCGAGCAG CTCGGCTTGCCGGTCTACGCGTCGATTCCCTACAGCGCCCTGCAGCAGGAAGAGGACAGCAAAAAAGTCCGGGCCAAAGT CGCGGCGGACACGCCGGCGTATCTGCTGGCCCTGCGCAACCCGACGGACCTGTCCATCGAATCGATCCGCAGCCTGCGCA CCTGCCTGCACTTCGCGGCGCTGGATTCGACCAACAACCGCATCATGATTTCCGGCCCGAGCCCGCAGGTCGGCAAGACC TTCGTCTCTTCCAACCTGGCGGCGGTCATGGCCCAGAGCGGGCAGCGCGTGGTGCTGATCGACGCCGACATGCGCAAGGG TCATCTGCACAAGACGCTGAACACGCCGATCACCAACGGCTTGTCGGATCTGCTGGTCAAGCGCTGCACCCTCGAGCAGG CGATCAACAAGGTCGAAGTCGACAACCTGCACTTCATCAGCCGTGGCCAGGTTCCGCCTAACCCTTCCGAACTGTTGATG CACGCGAATTTCCGCGAACTGCTGGCGCAACTCAGCGAGCGCTATGACGTGGTGATCATCGACACGCCACCGCTGCTGGC GGTGACCGATGCGGCGATTGTCGGTCGCGAAGCCGGCATCAGCCTGATTGTCGCGCGGTTCGGGGTGAACCCGGCCAAGG AAATCGAAATGACGATCCGGCGTTTCGCCCAGAACGGTATCGAGTTGAAGGGCGCGGTGTTCAACGGCGTCGAGAAGCGC GCGGCCAGCTATTACGGCAACGGCAGCTATTACAACTACGAATACGCGTCCGACCAGTCCTGA Protein sequence : MQLPSVIGTRENDQDSIDLLGIFGSLIDQKWLIGAFTGAFMMTGVAYAILATPVYLANALVQVEPKKNDMLGFSDLNSML GGQSPSVTEIGIIKSRAVIGKTVDDLRLDIDVTPNTFPLIGGFLSRRYRGETELSVAPPRFGLSSYAWGGERLEFAKLNL PKELLGKKLTLIAGEQHRFQLLDDNDNLLVDGVAGEAFAQDGVEGQIAQLLANPGTRFEVVRYPRIVTIQGYQDALDISE QGKESGIIRLALASSDAAEAVKILNKIASLYVDQNVRRTSAEAAQSLAFLQSQLPQVKRDLAKASDALNAYQTHGKTVNI SLETQSVLGQSVALETRISELKLQQAEMDRKFTKQHPAYRALMTQIGELTQQQRSLEGKVQDLPATQQELLNLTRDVEVA SQIYTQLLNKSQELDIIRAGAVGNVRLVDTADVDLTSPVKPKKALIVLIATFLGAFVGVALVLLRKSLSKGLEGPEAIEQ LGLPVYASIPYSALQQEEDSKKVRAKVAADTPAYLLALRNPTDLSIESIRSLRTCLHFAALDSTNNRIMISGPSPQVGKT FVSSNLAAVMAQSGQRVVLIDADMRKGHLHKTLNTPITNGLSDLLVKRCTLEQAINKVEVDNLHFISRGQVPPNPSELLM HANFRELLAQLSERYDVVIIDTPPLLAVTDAAIVGREAGISLIVARFGVNPAKEIEMTIRRFAQNGIELKGAVFNGVEKR AASYYGNGSYYNYEYASDQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf41 | AAO18066.1 | Orf41 | Not tested | TTSS locus | Protein | 2e-131 | 42 |
