|
Name : Pfl01_3769 (Pfl01_3769) Accession : YP_349498.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : Na+/H+ antiporter NhaC Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 4264919 - 4266235 bp Length : 1317 bp Strand : - Note : - DNA sequence : ATGAATGCAGTGATTGCTGCGGTCGGCGTCATGCTGATCCTCAGCCTGTCCCGGGTGCATGTGGTGATCGCGTTGATCGT CGGTGCGCTGGTCGGTGGCCTGACCGGTGGTCTGGGCATCGACGCCACGCTCAAGGCTTTCAACAGTGGCCTGGGTGGCG GGGCGACAGTGGCGTTGTCCTACGCGTTGCTCGGCGCTTTCGCCGTGGCGATTGCCAAGTCCGGCCTGGCCCACGCGCTG GCCGACAAGGCCCTGGCGATGGTCGACCGCCAGCATGCGACCGGTGGCGGCAGCGTCAAATGGCTGCTGATCGGCCTGCT GTGGGTGGTGGCGATCGCGTCGCAGAACATCCTGCCGATTCACATCGCGTTCATTCCGCTGCTGGTGCCGCCGCTTCTCT ATGTATTGACCAAGCTGCAACTGGACCGACGCCTGATCGCCTGCGTCATGACCTTCGGCCTGATCACGCCGTACATGTTC CTGCCGGTGGGCTTCGGCAACATTTTCCTCAACGAGATCCTGCTGGCCAACGTTGCCCGCAGTGGCGTGGACATCAGCGG TATCAACGTCACCCATGCCATGGGGATTCCGGCGCTGGGCATGCTGGTGGGGCTGGGCATCGCTTTTATCAGCTATCGCA AGAAGCGCGTCTACGACTTGGGCAAAATCGAGCAGGTCGAGCAGGTGGCGGTGCAGTACAACCCGCGAAGCCTGTTGATC GCCGGAGTCGCCATTGCCGCAGCCTTCATTATTCAGTTGCTGCTGGATTCGATGATTATCGGGGCGCTGACCGGTTTCCT GATCTTTTCAGCGTCGGGCATCGTCAAATGGCGCGAGACGGATGACCTGTTTACCGAAGGCATGAAGATGATGGCGATGA TCGGCTTCATCATGATCGCCGCTTCCGGATTCGCCGAAGTGATGAAGGCCACCGGCGAGGTGCAGACCCTGGTCGAGTCT TCGGCGTCGTGGATCAATCACAGCAAGGGCATCGGTGCGTTGCTGATGCTGCTGGTCGGTCTTCTGGTGACCATGGGCAT CGGCTCGTCGTTTTCCACGGTGCCGATTCTGGCGGCGATTTTCGTGCCGCTGTGCGTGCAACTGGGCTTCAGCCCGATTG CCATTGTCTGCATCGTCGGCACGGCCGGTGCCTTGGGCGATGCCGGTTCGCCCGCGTCCGACTCGACCCTTGGCCCGACC TCCGGTCTGAACATCGACGGCCAGCACCATCACATCTGGGACACCGTGGTCCCGACTTTCCTGCATTACAACCTGCCGCT GCTGGCGTTTGGCTGGGTGGCTGCGATGGTCCTTTAA Protein sequence : MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALSYALLGAFAVAIAKSGLAHAL ADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMF LPVGFGNIFLNEILLANVARSGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIAASGFAEVMKATGEVQTLVES SASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPT SGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWVAAMVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 9e-83 | 60 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 9e-83 | 60 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-82 | 60 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 1e-82 | 60 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 3e-74 | 52 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 3e-74 | 52 |
