Gene Information

Name : Pfl01_3769 (Pfl01_3769)
Accession : YP_349498.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : Na+/H+ antiporter NhaC
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 4264919 - 4266235 bp
Length : 1317 bp
Strand : -
Note : -

DNA sequence :
ATGAATGCAGTGATTGCTGCGGTCGGCGTCATGCTGATCCTCAGCCTGTCCCGGGTGCATGTGGTGATCGCGTTGATCGT
CGGTGCGCTGGTCGGTGGCCTGACCGGTGGTCTGGGCATCGACGCCACGCTCAAGGCTTTCAACAGTGGCCTGGGTGGCG
GGGCGACAGTGGCGTTGTCCTACGCGTTGCTCGGCGCTTTCGCCGTGGCGATTGCCAAGTCCGGCCTGGCCCACGCGCTG
GCCGACAAGGCCCTGGCGATGGTCGACCGCCAGCATGCGACCGGTGGCGGCAGCGTCAAATGGCTGCTGATCGGCCTGCT
GTGGGTGGTGGCGATCGCGTCGCAGAACATCCTGCCGATTCACATCGCGTTCATTCCGCTGCTGGTGCCGCCGCTTCTCT
ATGTATTGACCAAGCTGCAACTGGACCGACGCCTGATCGCCTGCGTCATGACCTTCGGCCTGATCACGCCGTACATGTTC
CTGCCGGTGGGCTTCGGCAACATTTTCCTCAACGAGATCCTGCTGGCCAACGTTGCCCGCAGTGGCGTGGACATCAGCGG
TATCAACGTCACCCATGCCATGGGGATTCCGGCGCTGGGCATGCTGGTGGGGCTGGGCATCGCTTTTATCAGCTATCGCA
AGAAGCGCGTCTACGACTTGGGCAAAATCGAGCAGGTCGAGCAGGTGGCGGTGCAGTACAACCCGCGAAGCCTGTTGATC
GCCGGAGTCGCCATTGCCGCAGCCTTCATTATTCAGTTGCTGCTGGATTCGATGATTATCGGGGCGCTGACCGGTTTCCT
GATCTTTTCAGCGTCGGGCATCGTCAAATGGCGCGAGACGGATGACCTGTTTACCGAAGGCATGAAGATGATGGCGATGA
TCGGCTTCATCATGATCGCCGCTTCCGGATTCGCCGAAGTGATGAAGGCCACCGGCGAGGTGCAGACCCTGGTCGAGTCT
TCGGCGTCGTGGATCAATCACAGCAAGGGCATCGGTGCGTTGCTGATGCTGCTGGTCGGTCTTCTGGTGACCATGGGCAT
CGGCTCGTCGTTTTCCACGGTGCCGATTCTGGCGGCGATTTTCGTGCCGCTGTGCGTGCAACTGGGCTTCAGCCCGATTG
CCATTGTCTGCATCGTCGGCACGGCCGGTGCCTTGGGCGATGCCGGTTCGCCCGCGTCCGACTCGACCCTTGGCCCGACC
TCCGGTCTGAACATCGACGGCCAGCACCATCACATCTGGGACACCGTGGTCCCGACTTTCCTGCATTACAACCTGCCGCT
GCTGGCGTTTGGCTGGGTGGCTGCGATGGTCCTTTAA

Protein sequence :
MNAVIAAVGVMLILSLSRVHVVIALIVGALVGGLTGGLGIDATLKAFNSGLGGGATVALSYALLGAFAVAIAKSGLAHAL
ADKALAMVDRQHATGGGSVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMF
LPVGFGNIFLNEILLANVARSGVDISGINVTHAMGIPALGMLVGLGIAFISYRKKRVYDLGKIEQVEQVAVQYNPRSLLI
AGVAIAAAFIIQLLLDSMIIGALTGFLIFSASGIVKWRETDDLFTEGMKMMAMIGFIMIAASGFAEVMKATGEVQTLVES
SASWINHSKGIGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPIAIVCIVGTAGALGDAGSPASDSTLGPT
SGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWVAAMVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 9e-83 60
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-82 60
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-82 60
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 9e-83 60
BJAB07104_00352 YP_008207817.1 putative permease Not tested AbaR25 Protein 3e-74 52
BJAB0868_00356 YP_008211682.1 putative permease Not tested AbaR26 Protein 3e-74 52