Gene Information

Name : pbpG (Pfl01_3700)
Accession : YP_349429.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : D-alanyl-D-alanine endopeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1686
EC number : -
Position : 4190045 - 4190983 bp
Length : 939 bp
Strand : +
Note : specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7

DNA sequence :
GTGAATATTCGTCTGTCCATCCTGAGCCTGGTTTTTGCATTTTCAGGCACACTCCTCACGCCCACGGTCAACGCCGCCGA
AACCACCGCTGCCCCCCGAGACGCCTCGCAACTGAAGATTGCGTCCGGCAGCGCCCTGCTGATGGATCTGCAGACCAACA
AAGTCATCTATTCCAGCAACCCGGACGTGGTGGTGCCCATCGCCTCCGTGAGCAAATTGATGACCGGGTTGGTAGTGGTC
GAAGCGCATCAGAACATGGACGAATGGATTGACGTCGACATCAGTCACACCCCGGAAATGAAAGGCGTGTTTTCCCGCGT
CAAACTGCGAAGCGAACTGCCCCGCCGGGAGATGCTGCTGATTGCCCTGATGTCCTCGGAAAACCGCGCCGCCGCCAGCC
TGGCCCACCACTATCCGGGTGGTTACGCGGCATTCATCGCAGCGATGAACGCCAAGGCCAAGGCGCTGGGCATGACCAGC
ACGCACTTTGTCGAACCCACCGGTTTGTCGGAGCGCAATGTCTCCACTGCCCGCGACCTGAGCAAGTTGCTGGTGGCCGC
GCACAAACAGCCGCTGCTCATCGAGCTGACCACCACCAAGGAAAAGACCGTCTCGTTCCGCAAACCCAATTACACCCTGG
GTTTCCGTAACACCGATCACCTGGTCAACAAGGCCGACTGGGATATCCGCATCACCAAGACCGGTTTCACCAATCCTGCC
GGTCATTGCCTGGTGCTGGTGACCCGCATGGCCAACCGTCCCGTCGCCCTGGTAATTCTCGACGCGTTCGGCAAATACAC
TCACTTTGCCGATGCCAGCCGCATCCGCAGCTGGGTGGAAACCGGCAAGAGCGCCAACGTTCCAGCGGTGGCTCAGCAAT
ACAAAGCCGACAAGAACCTCAAGAGTCGCCAGAGCGGCGTAATCGAAGCCTCCAAGTAA

Protein sequence :
MNIRLSILSLVFAFSGTLLTPTVNAAETTAAPRDASQLKIASGSALLMDLQTNKVIYSSNPDVVVPIASVSKLMTGLVVV
EAHQNMDEWIDVDISHTPEMKGVFSRVKLRSELPRREMLLIALMSSENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTS
THFVEPTGLSERNVSTARDLSKLLVAAHKQPLLIELTTTKEKTVSFRKPNYTLGFRNTDHLVNKADWDIRITKTGFTNPA
GHCLVLVTRMANRPVALVILDAFGKYTHFADASRIRSWVETGKSANVPAVAQQYKADKNLKSRQSGVIEASK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00303 YP_008207768.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR25 Protein 1e-31 42
BJAB0868_00307 YP_008211633.1 D-alanyl-D-alanine carboxypeptidase Not tested AbaR26 Protein 1e-31 42