|
Name : Pfl01_3582 (Pfl01_3582) Accession : YP_349311.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 4047794 - 4049074 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATTCCAAACTGTTACGTAGCAACCTTCAGGACGTAGCGGACCGCCTGGCTTCCCGTGGCTTTGCCCTGGATGT CGCGCGCATCGAAGCGCTGGAAGAACAGCGCAAGACCGTCCAGACCCGCACCGAAGCACTGCAGGCTGAGCGTAACGCGC GTTCCAAGTCCATCGGTCAGGCCAAGCAGCGCGGCGAAGACATCGCGCCGCTGATGGCGGACGTCGAGCGCATGGCGGGC GAACTGAGCGCCGGTAAAGTCGAGCTGGAAGCGATCCAGACCGAACTGGATTCGATCCTGCTGGGCATCCCGAACCTGCC GCACGAATCGGTGCCGGTCGGTGAAGACGAAGACGGCAACGTTGAAGTCCGCCGTTGGGGCACGCCGACCGCGTTCGATT TCCCGGTTCAGGATCACGTGGCCCTGGGCGAGAAGTTCGGCTGGCTCGACTTCGAAACCGCCGCCAAGCTGTCCGGCGCA CGCTTTGCACTGCTGCGCGGCCCGATTGCCCGCCTGCACCGCGCACTGGCGCAGTTCATGATCAACCTGCACGTCACCGA GCACGGCTACGAAGAGGCCTACACGCCTTATCTGGTTCAGGCTCCGGCGCTGCAAGGCACCGGTCAATTGCCGAAGTTCG AAGAAGACCTGTTCAAGATCGCTCGCGAAGGCGAAGCCGATCTGTACCTGATCCCGACCGCCGAAGTGTCGCTGACCAAC ATCGTGGCTGGTGAAATCGTCGATTCGAAACAGCTGCCGATCAAGTTCGTCGCTCACACTCCGTGCTTCCGCAGCGAAGC CGGCGCGTCGGGTCGTGACACTCGCGGCATGATCCGTCAGCACCAGTTCGACAAAGTTGAAATGGTCCAGATCGTCGAGC CGTCGAAGTCGATGGAAGCGCTGGAAAGCCTCACCGCCAACGCCGAGAAAGTTCTGCAACTGCTGGGTCTGCCTTACCGT ACCCTGGCGCTGTGCACCGGCGACATGGGCTTCAGCGCGGTCAAGACTTACGACCTTGAAGTGTGGATCCCGAGCCAGGA CAAATACCGCGAAATCTCGTCGTGCTCCAACTGCGGCGACTTCCAGGCCCGCCGCATGCAGGCGCGTTTCCGCAATCCGG AAACCGGCAAGCCCGAGCTGGTGCACACCCTGAACGGTTCCGGTCTGGCAGTCGGTCGTACCCTGGTGGCCGTGCTGGAA AACTACCAGCAGGCCGACGGTTCGATCCGTGTGCCGGACGTGCTGAAGCCGTACATGGGTGGCCTTGAGGTCATCGGTTA A Protein sequence : MLDSKLLRSNLQDVADRLASRGFALDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQAKQRGEDIAPLMADVERMAG ELSAGKVELEAIQTELDSILLGIPNLPHESVPVGEDEDGNVEVRRWGTPTAFDFPVQDHVALGEKFGWLDFETAAKLSGA RFALLRGPIARLHRALAQFMINLHVTEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIAREGEADLYLIPTAEVSLTN IVAGEIVDSKQLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSMEALESLTANAEKVLQLLGLPYR TLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPDVLKPYMGGLEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-107 | 54 |
