|
Name : Pfl01_3466 (Pfl01_3466) Accession : YP_349195.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 3950899 - 3952272 bp Length : 1374 bp Strand : + Note : E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGCAATCTCTGAACACCACGCTGCTGATCATCGGCGGCGGTCCTGGCGGTTACGTGACGGCCATTCGTGCCGGGCAACT GGGCATTTCGACCATTCTGGTCGAGGGTGAATCGCTGGGCGGCACCTGCCTGAACATCGGCTGCATTCCGTCGAAAGCGC TGATCCACGTGGCCGAGCAGTTTCACCAGACGCAACATCACAACCAGCATTCGGCACTGGGCATCAGCGTTTCGGCGCCT ACCCTCGACATCACTAAAAGCGTCGAGTGGAAGGACGGCATCGTTGATCGCCTGACCACCGGCGTCGCCGCGCTGCTGAA GAAGAACAAGGTTCAGGTCATCAACGGCTGGGCCAAGGTCATCGACGGCAAGACCGTGGAAGTCGGCGACACCCGCATCC AGTGTGAACATCTGGTGCTGGCCACCGGCTCGAAAAGCGTCAATCTGCCGATCCTGCCGATTGGCGGGCCGATCATATCG TCCACCGAGGCGTTGGCGCCGAAGTCGGTGCCGAAACGCCTGATCGTGGTCGGCGGTGGTTACATCGGTCTGGAATTGGG CATTGCCTATCGCAAGCTCGGCGCCGAGGTCAGTGTGGTCGAGGCGCAGGATCGGATCCTGCCGGCCTACGACGCCGAAC TGACTCAACCGGTGCACGACGCGCTGAAGCAACTGGGCGTGAAGCTCTACCTCAAGCACAGCGTGCTGGGTTTCGACGGT ACGTTGCAGGTGCGCGATCCGAACGGTGACACGCTGAATCTGGAAACCGATCAGGTGCTGGTGGCCGTCGGTCGCAAACC CAATACCCAGGGCTGGAACCTTGAAGCGCTGAACCTGGACATGAACGGCTCGGCGATCAAGATTGACAGCCGCTGCCAGA CCAGCATGCGTAATGTCTACGCCATCGGCGACCTGAGCGGCGAGCCGATGCTGGCCCACCGCGCCATGGCCCAGGGCGAA ATGGTCGCCGAGCTGATCAGCGGCAAGACCCGCGAATTCAACCCGACCGCCATCGCTGCCGTGTGCTTTACCGACCCGGA ACTGGTGGTCGTCGGCAAGACGCCGGACGAGGCCAAGGCGGCGGGACTTGACTGCATCGTGTCGAACTTCCCGTTCGCGG CCAATGGCCGGGCGATGACGCTGGAATCGAAAACCGGCTTCGTGCGGGTGGTCGCCCGTCGAGACAATCATGTGATTGTC GGCTGGCAGGCGGTCGGTGTCGGGGTCTCGGAGCTGTCGACTGCGTTCGCGCAAAGCCTGGAAATGGGCGCGCGACTGGA AGACATCGGCGGCACCATCCATGCACACCCGACTCTGGGTGAAGCGGTGCAGGAAGCGGCGTTGCGTGCGCTTGGGCACG CGTTGCACCTGTAA Protein sequence : MQSLNTTLLIIGGGPGGYVTAIRAGQLGISTILVEGESLGGTCLNIGCIPSKALIHVAEQFHQTQHHNQHSALGISVSAP TLDITKSVEWKDGIVDRLTTGVAALLKKNKVQVINGWAKVIDGKTVEVGDTRIQCEHLVLATGSKSVNLPILPIGGPIIS STEALAPKSVPKRLIVVGGGYIGLELGIAYRKLGAEVSVVEAQDRILPAYDAELTQPVHDALKQLGVKLYLKHSVLGFDG TLQVRDPNGDTLNLETDQVLVAVGRKPNTQGWNLEALNLDMNGSAIKIDSRCQTSMRNVYAIGDLSGEPMLAHRAMAQGE MVAELISGKTREFNPTAIAAVCFTDPELVVVGKTPDEAKAAGLDCIVSNFPFAANGRAMTLESKTGFVRVVARRDNHVIV GWQAVGVGVSELSTAFAQSLEMGARLEDIGGTIHAHPTLGEAVQEAALRALGHALHL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-68 | 43 |
