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Name : Pfl01_3364 (Pfl01_3364) Accession : YP_349093.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 3840775 - 3842718 bp Length : 1944 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGGCTGTACCTCTGTGAAAAACCCTCCCAAGCCAAGGACATTGCGGCCGTACTCGGCGCAAAGCGTCGGGGCGACGG CTGCTGGCTGGGAACGGACGTCACGGTGACCTGGTGCATCGGCCACCTGCTGGAAACCGCGCCGCCGGACGCCTACGACG CCAAATACAAGCGCTGGGTGCTGGCCGACCTGCCGATCATCCCCGACAAGTGGAAAATGACTGTCAAGCCGCGTACCGCC AGCCAGTACAAGGCGGTCAAGCGCCTGCTCGGCGAGGCCAGCGAACTGATCATCGCCACCGACGCCGACCGTGAAGGCGA GATGATCGCCCGTGAGCTGGTCGAACACTGTCGCTATCGCGGGCCGATCCGCCGCTTGTGGCTGTCGGCGCTGGACGAAG CCTCGATTCGCAAGGCGTTGGCGGCACTCAAACCGGGCGCCGAAACCTTCAGCCTGTATCACTCGGCACTGGGGCGCTCG CGGGCGGACTGGCTGATCGGGATGAACATGAGTCGGCTGTTCACCCTGCTCGGCCGGCAATCGGGCTATCAAGGCGTGTT GCCGGTGGGCCGGGTACAGACGCCGACGTTGCGACTGGTGGTGGATCGCGACCGCAGCATCGCTGACTTCGTGCCGGTCG CGTACTGGGCCATCGACGTGCAACTGCTGCACGGAGACACGCCGTTCAACGCGCAATGGCGTGCACCGAACGATGCCTGT GACGATCAGGATCGCTGCCTCAATCAAGCCCTCGCCCAGCAAGCGGCCGCCGCAATCAGTAGCGCTGCCAGCGCCCGGGT GGTCAAGCTGCGCACCGAACGCATGCGCGAAGTGGCGCCCCTGCCCTTCGATCTGGGCACCTTGCAGGAAGTCTGTTCGA AGAAGCTCGGCCTCGGTGCCCAGGAAACCCTCGACATCGCCCAGGCCCTCTACGAAACCTACAAAGTCATCACCTACCCG CGCAGCGACTGCGGCTACCTGCCCCTGAGCCAGCACAACGAGGCGCCGGGGATTCTCGCAGCGCTGCGTCAGGCCGACCC GAGCCTGGAAGCGCTGCGCGAGCATCTGGAACCACAGCGTCGCTCCCGCGCCTGGAACGACGCCAAGGTCAGCGCTCACC ACGGCATCATCCCGACCGCTGCCGCGAAAAACCTGGAGCGCCTGACCGGCAAGCACCGCGCGGTCTACACGCTGATTCGC GCGCGGTATCTGGCGCAGTTCCTGCCCAATCACGAATACGACCGCACCCAGGCCGATTTCGATTGCGCCGGGGAAGCCTT GCGCGCTGTCGGCAAACAGATCATCGAGCCGGGCTGGAAACGCGCGTTGCCCGAAGCGCTGGCCCCGGCCAAGGGCCGTG AAGCCCCCGCGCCACAAACACTACCGACACTGACCCAGGGTGCCGAATGCGCCGTGGCAGACGTGAAGCTCAAGGACCTG TGGACGCAACCGCCCAAGCCCTACACCGAAGGCGACCTGATCAAGGCGATGAAGAACGTCGCCAAACTGGTGGAAGATCC GCTGCTCAAGCAGAAACTCAAGGACACCACCGGCATCGGCACCGAAGCCACCCGCGCGTCGATCATTCAAGGGTTGCTGG ATCGCGGCTATCTGGTGAAAAACGGCAAGGCGCTGTCCGCCACGCCCGCCGCGTTCAGCCTGATCGACGCCGTACCGCGC GCGATTGCCGACCCCGGCACCACGGCGATCTGGGAGCAGGCGCTGGACATGGTGCAGAGCGGCGAAATGAGTCTGGAAGA ATTCGTCACCAAACAGGCCGCGTGGATGAGCAAGCAAGTGACCCGCTGCGCCGGACTGAGCCTGACCATCAGCGGCCCGC CACCTGCCGGCAAGGCCGCTGCGCCATGGAAGAACAAACGCAAGACCACTCGGCGCAAAACCACCGGAACCAGCAAACGC GTGGCGAAACCAGCAGCCAAATAG Protein sequence : MRLYLCEKPSQAKDIAAVLGAKRRGDGCWLGTDVTVTWCIGHLLETAPPDAYDAKYKRWVLADLPIIPDKWKMTVKPRTA SQYKAVKRLLGEASELIIATDADREGEMIARELVEHCRYRGPIRRLWLSALDEASIRKALAALKPGAETFSLYHSALGRS RADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVQLLHGDTPFNAQWRAPNDAC DDQDRCLNQALAQQAAAAISSAASARVVKLRTERMREVAPLPFDLGTLQEVCSKKLGLGAQETLDIAQALYETYKVITYP RSDCGYLPLSQHNEAPGILAALRQADPSLEALREHLEPQRRSRAWNDAKVSAHHGIIPTAAAKNLERLTGKHRAVYTLIR ARYLAQFLPNHEYDRTQADFDCAGEALRAVGKQIIEPGWKRALPEALAPAKGREAPAPQTLPTLTQGAECAVADVKLKDL WTQPPKPYTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRASIIQGLLDRGYLVKNGKALSATPAAFSLIDAVPR AIADPGTTAIWEQALDMVQSGEMSLEEFVTKQAAWMSKQVTRCAGLSLTISGPPPAGKAAAPWKNKRKTTRRKTTGTSKR VAKPAAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 64 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 63 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 62 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 5e-148 | 49 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-143 | 49 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-147 | 48 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-147 | 48 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-147 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 6e-113 | 42 |
