Gene Information

Name : Pfl01_3067 (Pfl01_3067)
Accession : YP_348796.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3509409 - 3510035 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence :
GTGGTCGATGACCATGATCTCGTTCGTACAGGCATTACACGTATGCTGGCCGACATCGATGGCCTGCAGGTGGTAGGTCA
GGCCGAGTCCGGGGAAGAATCCCTCATCAAGGCTCGTGAGTTGAAGCCCGACGTGGTGCTGATGGACGTCAAGATGCCGG
GCATCGGCGGCCTCGAAGCCACGCGCAAACTGTTGCGAAGTCATCCCGACATCAAAGTGGTCGCTGTCACTGTGTGTGAG
GAAGATCCGTTTCCTACACGGTTGTTGCAGGCTGGCGCGGCGGGTTATCTGACGAAGGGTGCCGGATTGCCGGAAATGGT
TCAGGCCATTCGCCTGGTGTTTGCCGGCCAGCGCTACATCAGCCCGCAAATTGCCCAGCAATTGGCGATCAAATCCTTCC
AGCCCACCAACGACTCACCGTTCGATGCGTTGTCGGAGCGGGAGATCCAGATTGCGTTGATGATTGTCGGCTGTCAGAAG
GTTCAGATCATTTCCGACAAATTGTGCCTGTCGCCGAAAACCGTTAACACCTACCGCTACCGCATATTCGAGAAGCTCTC
GATCAGCAGCGATGTCGAACTGACGCTTCTTGCGGTTCGTCACGGCATGGTTGATGCCAGCCTCTGA

Protein sequence :
MVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVAVTVCE
EDPFPTRLLQAGAAGYLTKGAGLPEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTNDSPFDALSEREIQIALMIVGCQK
VQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELTLLAVRHGMVDASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-56 58
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-56 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pfl01_3067 YP_348796.1 two component LuxR family transcriptional regulator VFG1889 Protein 2e-54 57