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Name : Pfl01_3040 (Pfl01_3040) Accession : YP_348769.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : histidine kinase Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0642 EC number : - Position : 3479112 - 3482273 bp Length : 3162 bp Strand : + Note : - DNA sequence : ATGCCGCACGCCAATGCCCTGCTGGAAAAACTTGCCAACAGCTCGCAGCGCCTGAACAAGGGCTTGCTGATCCTCGGCGC GCTTGCGCTGCTGTTGCTGGGTATCAGTTATCTGGGCGTGCAGCGCATGGTGGAAGAACAGCGCGATACTCTGCAGTTTC ACTTCGCCCGCCTGATGGAAAACGTTCGTGAGCAGGAGGCCTTTCTCGGCGACATCTCACGGGCCGGCGCCAGCGGTGAA TACTTGCCGGTTACCGTGGCGTCGCCGATGGTGCAAAAACTGTTGCCCGAGGAAGGCCCGAACATTTATCAAGGCCGCGG GTTGCCGTTTTCGTTACCGTTCAGCGTGAAGATTGATCCGCAGCGAATTGCCCCCGACCAATATCCCAAGGTGTTTGCGC TGGGCAGCTATCTGGCGGCTTATTACAGCGCCTTCTGGGCGGCATCGCATTACCAGTCGCCGCAGGTGATCCTGCTCAAC GGCCCCGATAATTTCGACATCGCCGTGCCTGCCACCGGCCGTTTGCGCGGCGCCGGGCCAACGCAGGTAGGCCGGTTCGT CAAGCTTATGACCCAAATGAACATGCAGCGCCACTCACAGACTTCAGAGCAAGTGCTCTGGGCGCCCTACCCGTTCGAGC AGGACAACGATGGCACCCCGAGCCTGCTGGCCTACGTGCGGATGAACCTGAGCAAACCGACGCTGAGGATTGAGGGGGCG AACACCTGGGTGGTGCTCGGCTCGCTGTTGAAACTGTCGCAGGTCAACAATATCGAGCGTTTGATGGAGTGGTCGATCTA CGACAATTTCACCCTGATCACGCCCAACGGCACGGTGTTGATCGGTGCGCTCAAGCCAAATCAAATGCTCGATGACGGCG CGAACCTGACCCGCGACGGCCTGGTGTTCAAGCTGACCAGCGCCGGCGACCAACGATGGACGGCGATCTATGTAATCAGC GTGCAGAGTTTTCTCGATTACGCGCTGTGGCCACTGCTGTGCCTGCTGGCTCTGGTGCTGGCCCTGCTTGGCAGTGGCCG CGCGCTCAATCGCTGGTACACCGACCGCGTTATCCTCCCCGCGCAAAGTGCCCACGCTAGCATCGCCGAAAGCGAAGCCT TCTGCCGTGCGGTCATCGACACCGCGCCGACCGGCCTGTGCGTGATCAGCCGCCGCAATCATCAGGTGTTGCTGGAAAAT CAGCTCGCCCAGCAATGGCACGACTCTGGCGAACTGATCAGCCTGCTTGACCAGCAGGCGGCGACTGGCCATGGCCATGC CGAACTGGAGATAGACAGCCGGCATTTGCATGTCGCCTTCGTCGCCACCCGTTATCAGGGCCAGGACGCCTGGCTGTGTG CGCTGCACGACGTCACCCGCCATGTTGAAGACTCGGCGGCGCTGGAAGTCGCGCGTCAGGCCGCCGACTCGGCGAATCAG GCCAAGAGCCGCTTTCTGGCGACCATTAGTCATGAAATCCGCACGCCGCTGTATGGCGTGCTCGGCACTCTGGAGCTGCT TGGCCTGACCGCGCTCGCCCCGCGCCAACAGGAATATCTGGAAACCATTCAGCGCTCGTCGGCCAGTCTGTTCAAGCTGA TCAGCGATGTGCTGGATGTGTCGAAGATCGAGGCCGGGCAGATGAACCTCGAGCTTCAGCCATTCTGCCCGCTAGAGCTG ACCGAAGACGTAGTGCGCAGCTACGGCGCGTTTGCCCGCGGCAAAGGGTTGCAATTGTATGCCTGCATCGATGCAGCACT GCCGGATCACCTGCTCGGTGATGCGCAGCGCATTCGCCAGATCCTCAACAACCTGCTGAGCAACGCGATCAAGTTCACCG ACAACGGCCGTGTGGTCGTGCGCGTTCGCGTGCTGCAAAACTCAGGCGGTCAAGCCCGGGTGCAGTGGCAGGTCAGCGAC TCGGGCGTGGGCATTTCCCAGGCGCAGCAACAGCAATTGTTCGACCCTTTCTATCAAGTCAACGAGGCCGACAGTCATGC CGGCGCGGGTCTCGGTCTGGCCATTTGCAAATGGCTGTGCGAGTTGATGCACGGCCAGTTGAATGTGGTCAGTGAACCGG GACTGGGCAGCTGCTTCAACTTGCAACTGATGCTCGAATGCGCCTCGGACAGCCTCGCCGATTGCCCGGCGTTCGGCGCC GACAGCCCCGCTGTCTACGTGCGTGCGCCAGTCGCTGAACTGGCGCAACATCTGATGGCGTGGCTCAACCGCTTTGGCCT CGACTGTCGACTGGTGACCAACGAGCTGCCGCCTCCTTCGGCGCTGCTGGTCGATCTTGCACCACTGGCCAGCGCTACAG CTTTCGCTGGCCAGCGAATCGTCGCAATTGCCGCTGGCCCCAACCCGGCGCAGGTGAGCGGCAATGGTTGGCAGGTCGAT GCCGACGACGTGCGCGCGATCGGCTGGGCGATTGCCCTCGCCGTGCACGGCGCCGGTCAGCAGCGCCCGCCGTCACGGCA AGCAAGCACCCGAGCGCTAAACCTACGCGTGCTGGTGGCCGAGGACAATGCGATCAACGCGGCGATCATCAAGGAACAAC TGGAGGCGCTGGGCTGCTCGGTAGTCGTCGCGGCCGATGGCGAACAGGCTTTGGCGCACTGGGCACCGGGGCGCTTCGAT TTGCTGCTGACCGACGTCAACATGCCGGTCATGAACGGCTATCAACTGGCCGCAGCACTGCGAGAGCAGGATCCTACGCT GCCGATCATCGGCGTCACCGCCAATGCCCTGCGCGAAGAAGGCGAGCGCTGCGCCGCCGTCGGCATGAACGCGTGGATGG TCAAACCGTTGAACCTGGCGACGCTGCGTGCGCAACTGCAAAGCCATTGCCAGATCACCATCGCACCGATTGCCGATGCT CCCCCGACGCTATCGCCGAAAATGCGCGAGCTGTTTGTCGTGACCCTGCGCCGCGACATTCAGAGCACCCTCAGCGCACT GGACGCGGCCAACGCCGACAGCGTCGCGCAGCAACTGCACAGCATGGCCGGGGCACTGGGCGCGGTGCAAGTCGCGACAC TGGCCAGCGCATTTGTCGAACTGGAATGTCGCCTGACCGGCATGGCCGTCACCCCGGCGCTGGCCGTGGAGGTGCGTCAA CAACTGGCGCGCCTGAGCGACCTGCTCGACGCCCTTGAATAA Protein sequence : MPHANALLEKLANSSQRLNKGLLILGALALLLLGISYLGVQRMVEEQRDTLQFHFARLMENVREQEAFLGDISRAGASGE YLPVTVASPMVQKLLPEEGPNIYQGRGLPFSLPFSVKIDPQRIAPDQYPKVFALGSYLAAYYSAFWAASHYQSPQVILLN GPDNFDIAVPATGRLRGAGPTQVGRFVKLMTQMNMQRHSQTSEQVLWAPYPFEQDNDGTPSLLAYVRMNLSKPTLRIEGA NTWVVLGSLLKLSQVNNIERLMEWSIYDNFTLITPNGTVLIGALKPNQMLDDGANLTRDGLVFKLTSAGDQRWTAIYVIS VQSFLDYALWPLLCLLALVLALLGSGRALNRWYTDRVILPAQSAHASIAESEAFCRAVIDTAPTGLCVISRRNHQVLLEN QLAQQWHDSGELISLLDQQAATGHGHAELEIDSRHLHVAFVATRYQGQDAWLCALHDVTRHVEDSAALEVARQAADSANQ AKSRFLATISHEIRTPLYGVLGTLELLGLTALAPRQQEYLETIQRSSASLFKLISDVLDVSKIEAGQMNLELQPFCPLEL TEDVVRSYGAFARGKGLQLYACIDAALPDHLLGDAQRIRQILNNLLSNAIKFTDNGRVVVRVRVLQNSGGQARVQWQVSD SGVGISQAQQQQLFDPFYQVNEADSHAGAGLGLAICKWLCELMHGQLNVVSEPGLGSCFNLQLMLECASDSLADCPAFGA DSPAVYVRAPVAELAQHLMAWLNRFGLDCRLVTNELPPPSALLVDLAPLASATAFAGQRIVAIAAGPNPAQVSGNGWQVD ADDVRAIGWAIALAVHGAGQQRPPSRQASTRALNLRVLVAEDNAINAAIIKEQLEALGCSVVVAADGEQALAHWAPGRFD LLLTDVNMPVMNGYQLAAALREQDPTLPIIGVTANALREEGERCAAVGMNAWMVKPLNLATLRAQLQSHCQITIAPIADA PPTLSPKMRELFVVTLRRDIQSTLSALDAANADSVAQQLHSMAGALGAVQVATLASAFVELECRLTGMAVTPALAVEVRQ QLARLSDLLDALE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rcsC | AAP84165.1 | RcsC | Not tested | PAPI-1 | Protein | 7e-170 | 42 |
