Gene Information

Name : Pfl01_3033 (Pfl01_3033)
Accession : YP_348762.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : DNA primase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4227
EC number : -
Position : 3469935 - 3470897 bp
Length : 963 bp
Strand : +
Note : -

DNA sequence :
ATGCGCGATATCTACCAAGACGTGACTGACAAGATCGTTACCGCTTTGGAACAAGGCGTAGCCCCCTGGATCAAACCCTG
GTCCTCAAGTGGCTCAGCTCACGTCGGTCATCATCACCCCTACCCCATTAACGCCATTACGCGGCGTCCCTATTCGGGCA
TCAATTTACCGCTGCTCTGGGCCGAGGCCAGGTTGCAGGGGTTCACTCAAGATCGTTGGCTGACCTTCAACCAGGCCAAA
AAAGCCGGTGGGCACATCCGCAAGGGTGAGCACAGCACTCTGGCGGTGCTCTACAAGCCGATGGAGCGCGAGGAACAGAC
CGAGTCAGGTCAACCCGTACTTGATGAGAACGGTCAGCCCAAGGTCGCTCATTTCGGGATTCTCAAGACGCATTTTCTGT
TCAACATCGAGCAAACGGAGGGGCTCGAAACGCTCAACGAAACCGTGCTCGAGACGGAGCCGAGCGATCCCTTCCTCCCC
AACGGCGCTGCGGAAAATCTGTTGTTACGTTCGGGCGCAAACATCATTCATCGATTTGCCGACGAAGCTTTTTACCACCC
GATCAGGGATCTCATCCAACTGCCGACAAAAGCGCAATTTCACGATCAAGGTGGGTACTACGCCACCGCACTTCACGAGT
TGACGCACTGGACCGGGCATCACACTCGGTTGCAGCGCGAAGGCGTGACGTCATCCTGTCCGTTCGGCTCGCCAGGCTAT
GCCTTTGAGGAGTTGATCGCCGAGATGGGCGCTGCGTTTTTATGTGCTTACGCCGGCATTCAGGGAGAGCTGAGGCATGG
GGGCTATATCGATTCCTGGCTCGGCCTGCTCAAGGCTGACAAACGTGCAATCTTCCGCGCCAGTGGCCAGGCCCGAAGCG
CCTCAGAGTATGTACTCAACCTGGAGCAGCAACTGAGGCAAGATGTCTTGGATGACTCGCTGTGCATGAACGATGGAGCT
TAA

Protein sequence :
MRDIYQDVTDKIVTALEQGVAPWIKPWSSSGSAHVGHHHPYPINAITRRPYSGINLPLLWAEARLQGFTQDRWLTFNQAK
KAGGHIRKGEHSTLAVLYKPMEREEQTESGQPVLDENGQPKVAHFGILKTHFLFNIEQTEGLETLNETVLETEPSDPFLP
NGAAENLLLRSGANIIHRFADEAFYHPIRDLIQLPTKAQFHDQGGYYATALHELTHWTGHHTRLQREGVTSSCPFGSPGY
AFEELIAEMGAAFLCAYAGIQGELRHGGYIDSWLGLLKADKRAIFRASGQARSASEYVLNLEQQLRQDVLDDSLCMNDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3460 YP_001007622.1 hypothetical protein Not tested YAPI Protein 8e-59 45
api91 CAF28565.1 hypothetical protein Not tested YAPI Protein 6e-58 45
YpsIP31758_3690 YP_001402644.1 antirestriction protein Not tested YAPI Protein 9e-58 45
PMI2554 YP_002152273.1 DNA primase Not tested Not named Protein 1e-55 45
unnamed AAP70295.1 antirestriction protein Not tested HPI Protein 6e-48 45
Pmu_02920 YP_005176191.1 hypothetical protein Not tested ICEPmu1 Protein 2e-50 42