|
Name : Pfl01_3029 (Pfl01_3029) Accession : YP_348758.1 Strain : Pseudomonas fluorescens Pf0-1 Genome accession: NC_007492 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 3465587 - 3467131 bp Length : 1545 bp Strand : + Note : - DNA sequence : ATGCTCATGAGCACCAACAGCTACCTGGAATTTTACCTCTCCCTGCTGGCCTGGATCATCAACAACGGCCTCTGGAGCGT CCTGTCCGATACTGGGCTGTTTGCCGCGCCCTTCGGTGCAATCATCTTGCAGGAATGGTTGTCTGCTCGTCAGCAAGGCG CGGATGAAGGCAACAAGGGACTGCTCTCGGTGCCACGGATCGAGAACCGGTTGTGGCTGGCCTACATCGTCGTCTTGTTC GGTTGCGCCCCCGTCTTTCCGTTGAGTCTTGCATCAATGGCGTTCGACGATGCGGCGAGCCAGCGCTGCGGCGTGAGTGT GGCCAAGCCTGCGGAAACCGCCTGGGGGACGACCTTCAATACCATCGGCGAACGCTCTGCCAACGTGCCGATCTGGTGGT TTCTGGTGCATGCCTTGAGCAAAGGTGTGACTGCGGCGGCCACCGCCTCCATCCCTTGCGCACCGGATATCCGGCAAATG CGCATGGAGATCGACAGCTCGCGCATCGACAGTCAGGTGCTGCTGCAGGAAGTCGCCGACTTCACTCGCGACTGCTACGG CTATTCCCGTTCTCGGTTGTTTACCAATCGCCCGCAACTGGACAAGTCACAAAGTCACGACGCATCCTGGATCGGCTCAA GCTATTTTCTCGACACACCCGGCTACTACGACACCGATCGCTCACGAACGCCGCGAGTCAGTTGGCCGTATGACGACAAC CGCGATGTTTCCCTGCCGCGGCTGGAGAATGGCGCGGGCTACCCCACTTGCAAACAGTGGTGGAGCGACAGCGGTGTCGG GTTGCGCGAGCGCTTGATCGAGCAAGTCGATCCTTCGCTGCTAACTCAGCTAAAAGGTTGGTTGACTGGCCGATCGAGCA ACGAGATCGAGGATGCCACCCTGCGTGAGCTGGTCAGTCCGCGCCAGCAATCGATGACCATGTCGCCCGGACAGGTGTAC CAGGACTATGGCTCCAGCGCCCGTGGCGGCTCGATCAATCAGGGGCTCAATAATCTGGCCACCAATACCGGGTTAGCACT GGGCTCCTTCAGCAACTTCCCGGCGCTGAATGCGCTACGCGCCGCCCTACCGATGGTGCAGGCGTTCCTGATCATGGGCA TCATCATCAGCTTGCCGCTGATTCTATTGGTCAGTACCTACCAGTTGAAGACCGTCATGACGGTGACGTTCGCACTGTTC ACACTGCATATGCTGAGCTTCTGGTGGGAACTGGCCCGCTGGGTCGACTCCAGCATGCTCGATACCTTGTACAACCAGGT TTCGGCGTCCAATCAGATGCTGTTGTCGCTGCCCACATCCGGACTTATGGATGGGACGGTCACCGCGCAGGTGATCGAGT ACGTGATGGGGGCAATGTTCGTCGTGCTTCCGATGTTGTTTTTGGCTGCAATGAGCTGGGCAGGATATAGCGTTGGCTCA ATTGCCGACGGCATGCTTAGCAAAGGAGCAGCTCAAGCGCAGGACGCTGGTGCAAGGGGCGCTGGAGCTCTGATGTCTGC TGGAAAGGCCTTAAGGAAGGGGTGA Protein sequence : MLMSTNSYLEFYLSLLAWIINNGLWSVLSDTGLFAAPFGAIILQEWLSARQQGADEGNKGLLSVPRIENRLWLAYIVVLF GCAPVFPLSLASMAFDDAASQRCGVSVAKPAETAWGTTFNTIGERSANVPIWWFLVHALSKGVTAAATASIPCAPDIRQM RMEIDSSRIDSQVLLQEVADFTRDCYGYSRSRLFTNRPQLDKSQSHDASWIGSSYFLDTPGYYDTDRSRTPRVSWPYDDN RDVSLPRLENGAGYPTCKQWWSDSGVGLRERLIEQVDPSLLTQLKGWLTGRSSNEIEDATLRELVSPRQQSMTMSPGQVY QDYGSSARGGSINQGLNNLATNTGLALGSFSNFPALNALRAALPMVQAFLIMGIIISLPLILLVSTYQLKTVMTVTFALF TLHMLSFWWELARWVDSSMLDTLYNQVSASNQMLLSLPTSGLMDGTVTAQVIEYVMGAMFVVLPMLFLAAMSWAGYSVGS IADGMLSKGAAQAQDAGARGAGALMSAGKALRKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C40 | AAN62133.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-118 | 50 |
| ORF SG48 | AAN62270.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-114 | 49 |
| unnamed | ABR13354.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-111 | 48 |
| RL014 | AAP84141.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 2e-112 | 47 |
| EXA17 | ABD94626.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-111 | 47 |
| pph92 | CAI36133.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 8e-115 | 47 |
| PMI2570 | YP_002152289.1 | hypothetical protein | Not tested | Not named | Protein | 5e-83 | 42 |
