Gene Information

Name : Pfl01_3027 (Pfl01_3027)
Accession : YP_348756.1
Strain : Pseudomonas fluorescens Pf0-1
Genome accession: NC_007492
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3463882 - 3465264 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCGGCTTCTCGCACGACCATGGTTGGGCGCGATGAGTCTGTTGCTCTGTGGACTGCTCGCCATGGCTACTCATGC
CCACGCAGCCGAGGGCGATTACCGCCTGGGCACTCAAGGCGAAGTACTCGACGACCGAGTGATGTACACCATTGGTGGCG
GCTCGACAGTCGGCTCACCGAGTTCGCTCTACCGACCCAGCGGTCTCGGTGTCGGCGGGTCCTGGCGCGCGAACATGATG
TGCGGAAACATGAGCCTCACCAACACCCTGCAAAACCAGCTGAACGGCGTCACCGAAGGTTTCCAGCAGATCATGGGCAG
CATCGTGCAGAACGCGACCCAAGCGGTGATGTCGCTGCCGGCGTTGATCATCCAGCGCGCCAACCCCGGTCTCTATGAGT
TGCTCAGTAACGGGGTGATGCAGGGGCGCATCGACTTCGATCGTTCCAAGCTGACCTGCCAGGCCATGGCAGAGAAGATG
GCGGACAAAGTTGGTCAAGCCGGTTGGGGTGCGCTGGCCAAAAACCAGGAGATGCAGGTCAATCTGGAGCAAACCGGCGG
TGATGCGGTGGCAGCGGTGAAAAACACCGAGGCCCATAACGGCAACAATGGGGTGTCCTGGGTCGGCGGTTCGAAGGCCG
GAGGGAACGGACAGACGCCCATTCGAGTGACCGCCGACGTGGTCCGTGCAGGCTATAACCTGCTGCATAACCGGTCGGTG
GATGACAGCGCCTCGATCAGTAGCAGCGACTGCTTAGGCGGGGCTATTTGCCAGACATGGACCTCGCCCCAAGAGGAATC
CGAATGGGCCGTTCGGGTGTTGGGCGAGACCGAAGTCGCGACCTGCGACACATGCGAAACCCTGCGTGCTACCGCTGGCA
GTGGATTGACGCCGTTGATTCAGGAGGCCTATAGCGAACGCCTGAAGGCCCTGCAGGAGTTGCTGTCTGGCTCTCTCCCG
CCTACCCCTGACAACCTGGCTAAAGCCTCCAGCCCGATGTTACCGGTGACCCGAGGCGTGGTCGAAGCCCTGCGTGACGA
TCCCGACCAGGATCTGCTGGCACGGCGTTTGGCCAGTGAGACTGCCCTGTCCAGCGTACTCGACAAGGCGTTGCTGCTAC
TGCGTACGCTACTGGCGGGCAGTCACGAACCGAACATCGCCTCCGCCGAACCGGCCCAGATCGCCTTGACGAAAAACATC
GACGCCTTGGAGCGCGAAATTCGCCTGCTGCAGACCGAGCTGCAGGTCAGGCAGATGCTGACGACCAATACCGCCAGCCT
GGTGCTCGACCGGCATGCCGGTGGCGCTGATGCTTCGCGCACCGTCGAGCAAGGCGACCCTGAGCCCGGTCGACTTAATG
ATGCTGACACCAGGCGCAAGTGA

Protein sequence :
MSRLLARPWLGAMSLLLCGLLAMATHAHAAEGDYRLGTQGEVLDDRVMYTIGGGSTVGSPSSLYRPSGLGVGGSWRANMM
CGNMSLTNTLQNQLNGVTEGFQQIMGSIVQNATQAVMSLPALIIQRANPGLYELLSNGVMQGRIDFDRSKLTCQAMAEKM
ADKVGQAGWGALAKNQEMQVNLEQTGGDAVAAVKNTEAHNGNNGVSWVGGSKAGGNGQTPIRVTADVVRAGYNLLHNRSV
DDSASISSSDCLGGAICQTWTSPQEESEWAVRVLGETEVATCDTCETLRATAGSGLTPLIQEAYSERLKALQELLSGSLP
PTPDNLAKASSPMLPVTRGVVEALRDDPDQDLLARRLASETALSSVLDKALLLLRTLLAGSHEPNIASAEPAQIALTKNI
DALEREIRLLQTELQVRQMLTTNTASLVLDRHAGGADASRTVEQGDPEPGRLNDADTRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-94 57
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-89 56
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 3e-92 54
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-91 54
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 3e-91 54
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 2e-89 53